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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vvi15g0298
ATGGAGGATCAGAAGCAGCCCCCAGACCAAGTTGTGGTGGTGATAGACCAGCCCAAAGCGCCTCCAACCACTCTCCGGCGTCTCAACTACCCTAAACCCAAAGCCCGGTTCGCCGAGACCAACTACCCGATCCCACCAAAGTCTGAAGAGCTCGAACCCTTAAACCCCTACGAGGACTCATCGTCGGATGACGATGATGAGTGGTTTGATGATGTAGACAAGGAAGACGAAGAAGATGGCAAGTATCGCGAGCAAGCTAGGAAGAGGAGGAGGATCAACCGAAGAGCCTTGATCGAGTGGGTGCTGTTCTGCACGATCATGACCGGTTTGATTTGCTCTCTCACCCTCAAGTCTCTGAAGGATGAGGTGAAATGGGGGTTGAAGATATGGAAATGGTGCCTCATGGTGATGCTGCTTTTCTGCGGCCGCCTCGTCTCCGGTTGGGTGGTGGGGTTCCTGGTCTTCATCATCGAGCGCAACTTCATGCTCCGAGAAAAGGTTCTGTATTTCGTCTATGGCCTCCGGAAGAGCTTCCAGAACTGCGTGTGGCTGGGCCTGGTGTTGCTGGCGTGGATGATCATGTTCCCCAACGTCCACAAGCACAACAAGGTCTTACAGAAGGCCTTCAGGGCACTGGTGGCGGTGCTGATCGCGGCCACCATCTGGCTCCTAAAGATCGTAATGGTCAAGGTGCTGGCCTCCTCCTTCCACGTCGCGACCTTCTTTGATCGGATGAAGGAGAGCGTGTTCCACCACTACGTGCTGGAGGCGCTCTCGGGTCCGCCGCTGGACGAGGAGGAGCGGGATAGGCCGAAGCGGCGGGTGCTGATGGCGTCCCAGTCATTGCCGGCGAAACTGAGGGATGGGCCGCCGAAGACGGTAACCCAGACAAAGTCGTCGAGGAAAATAGACATGAAGAAGCTGAGGAGGCTGAGCAGAAGGGCGTCGGCGTGGAGCGTGAAGCGGCTGGTGAGCTACGTGAGGTCGTCGGGGCTGTCGACGATATCGAGGACGGTGGATGATTTTGGGAAGGCGGAGTCGGAGATCACCAGCGAATGGGAAGCCAGAACATCCGCTCAAAGGATATTCAAGAATGTGGCCAAGCCTCATGCCAAATTCATAGAAGAGGAAGACCTACTGAGATTCTTAACGAGTGATGAGGTTTGCACCATATTACCTCTATTTGAAGGGGCTGTTGAGACCTCAAGGATCACCAAGTCTTCTTTCAGAAATTGGGTGGTACAAGCATACGTAGAGAGGAAATCTTTAGCTCATTCTCTGAATGATACAAAGACTGCAGTCCACCAACTTCACAAGATAGCGAGTGCAATTGTGATAGTAGTAATAGTAGTGGTATCTCTTCTGGTAATGGGCTTGGCAACCAGCAAAGTCATACTTGTGGTTACTTCCCAGCTGCTCCTCGCGGGTTTTGTCTTCCAAAACAGTTGCAAAACCGTCTTCGAATCCATCATTTTCGTCTTTGTCATGCATCCATTCGACGTTGGTGATCGTTGTGTTATCGATGGTGTTCAGATGATTGTAGAAGAGATGAACATTTTGTCGACGGTGTTTCTCCGATTTGATAGTGAGAAGATATATTTTCCCAACTCGGTTCTTCTCACCAAGCCCATTAGCAATTTCAGAAGAAGTCCCGACATGGCTGATATGATTGATTTCGTCATTGATTTCTCCACTCCTTTGGACACCATTAATAATCTTAAGAAGGCTATACAAACGTACATTGAGGGCAAGCCAAAGTATTGGAACCAGAAGCACACAGTGATAGTGAAGGAGATTGAAAACATGAACAAGCTGAAGATGTGTTTGTGTGTTACGCATACGATGAACCATCAAAATTTTGGTGAAAAGAATCTGCGAAAAACAGAGCTCCTTTTCGAGTTGAAAAGGATTTTTGAGAGCCTTGGCATCAAGTACCATTTGCTTCCTCAAGAGGTTCATCTCACTCAAGTTAACATGCCTATGCAAGCTTAG
1992
0.4975
MEDQKQPPDQVVVVIDQPKAPPTTLRRLNYPKPKARFAETNYPIPPKSEELEPLNPYEDSSSDDDDEWFDDVDKEDEEDGKYREQARKRRRINRRALIEWVLFCTIMTGLICSLTLKSLKDEVKWGLKIWKWCLMVMLLFCGRLVSGWVVGFLVFIIERNFMLREKVLYFVYGLRKSFQNCVWLGLVLLAWMIMFPNVHKHNKVLQKAFRALVAVLIAATIWLLKIVMVKVLASSFHVATFFDRMKESVFHHYVLEALSGPPLDEEERDRPKRRVLMASQSLPAKLRDGPPKTVTQTKSSRKIDMKKLRRLSRRASAWSVKRLVSYVRSSGLSTISRTVDDFGKAESEITSEWEARTSAQRIFKNVAKPHAKFIEEEDLLRFLTSDEVCTILPLFEGAVETSRITKSSFRNWVVQAYVERKSLAHSLNDTKTAVHQLHKIASAIVIVVIVVVSLLVMGLATSKVILVVTSQLLLAGFVFQNSCKTVFESIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILSTVFLRFDSEKIYFPNSVLLTKPISNFRRSPDMADMIDFVIDFSTPLDTINNLKKAIQTYIEGKPKYWNQKHTVIVKEIENMNKLKMCLCVTHTMNHQNFGEKNLRKTELLFELKRIFESLGIKYHLLPQEVHLTQVNMPMQA*
664
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vvi15g0298
663
Gene3D
-
498
547
IPR023408
-
Vvi15g0298
663
MobiDBLite
consensus disorder prediction
1
85
-
-
Vvi15g0298
663
PANTHER
MECHANOSENSITIVE ION CHANNEL PROTEIN 5
28
659
IPR016688
-
Vvi15g0298
663
FunFam
Predicted mechanosensitive ion channel
498
547
-
-
Vvi15g0298
663
Pfam
Mechanosensitive ion channel
439
644
IPR006685
GO:0016020|GO:0055085
Vvi15g0298
663
SUPERFAMILY
Sm-like ribonucleoproteins
488
547
IPR010920
-
Vvi15g0298
663
MobiDBLite
consensus disorder prediction
56
75
-
-
Vvi15g0298
663
PIRSF
Memb_At2g17000
23
663
IPR016688
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vvi15g0298
Vvi-Chr15
8452018
8458037
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vvi15g0298
4
658
Mechanosensitive Ion Channel Family
AT5G12080
44.269
0.0
593
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vvi15g0298
K22048
-
vvi:100260421
1233.78
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