Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0289 ATGCCCTGCACCCTAATTACAGGGACAACCATGAACTCCTGGTTGGATTTAAGAGTGCTTATTGAGTTTAGTTTTAGGCAGAGAATGCACCGGATCAAATGGACTAGCAATTATGCAGCATGCTACAATCTTCTCTGCTTGGGTTTTATTCCAATCGACAGTGGGGTAGCCAAAAGGGCAGCAGAGCAGATCCTTGTCATACGAGAGGTATCAGTCATTGACCACGCAATGCTGGATAAGCTTACTGCTGAAAGTGAGGAACTGAAGTCCTTGATGAGCTCCTTGGAAAAGAGAATTGATGAAACATAG 309 0.4434 MPCTLITGTTMNSWLDLRVLIEFSFRQRMHRIKWTSNYAACYNLLCLGFIPIDSGVAKRAAEQILVIREVSVIDHAMLDKLTAESEELKSLMSSLEKRIDET* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0289 102 Coils Coil 78 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0289 Vvi-Chr15 8251483 8252057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0289 56 102 Myosins gene family AT4G28710 53.191 2.60e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0289 K10357 - vvi:100256590 73.559