Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0286 ATGAAAATAAAGAGACGTAAATCAAATAAAAAAATATTAAAAATTATTGAAAGCAAGTTGTGTTTCTTTCAATTTCATCTTTTCATGCTAAGGCTAAGCTCAAGTGCTTTGAGGTCATTACAACGGGCTTGCTCAACTGTAGATTTCTCGAAACTGCTAAGCGTGAATTGTCTTTTTGCTCTGAGGATTGTTTGGGCTCCCAAAATCAAAGGCATAGAGTATGAAACCATATTTGAAGATCTCTCCAACAAGAGCCCTTCCCTTCTCCACTATAATCCTGTCCACAAAAAAGTTCCAATTCTTATACACAATGGAAAACTGATCGTGGAATCGCTTGTCATTCTTGAATACATTGATGAGACATGGAAGGAAACTTCCTTGTTGTCTGAAGACCTTTACGAGAGAGCCATGGCTCGCTTCTGGGCCAAATTTGGCGATGATAAGGTTGTGACATCAATCTTTCAGGGTTTCTTCCTCAAGGAAGGGAAAGAGAAAAAGAAAGCCATGGTTGAAGCCATGAAGCACCTTCAGTTCTTGGAGGACAAGCTGAAGGGAAAGAGGCTCTTCGGCGGAGAGAGGATTGGGTTTGTTGATCTTGCCTTGGGATGGCTTGCTAACTTTATCAGCATATTTGAAGAGGTAGTTGGCCTGAAAATAGTGGATGAGGATAAGTTTCCATTGTTGTCCGAATGGATGAAAGAATTTTCAGATTCTCCCATAATCAAAGACAACTGGCCACCACAAGACAAGATGATTGCCAAGTTCCATGCCCTTTATGATGCCACCATTGCAGCAGCAGCAGCATCTAAATGA 813 0.4084 MKIKRRKSNKKILKIIESKLCFFQFHLFMLRLSSSALRSLQRACSTVDFSKLLSVNCLFALRIVWAPKIKGIEYETIFEDLSNKSPSLLHYNPVHKKVPILIHNGKLIVESLVILEYIDETWKETSLLSEDLYERAMARFWAKFGDDKVVTSIFQGFFLKEGKEKKKAMVEAMKHLQFLEDKLKGKRLFGGERIGFVDLALGWLANFISIFEEVVGLKIVDEDKFPLLSEWMKEFSDSPIIKDNWPPQDKMIAKFHALYDATIAAAAASK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0286 270 SFLD Main.3: Omega- and Tau-like 55 264 IPR045073 -
Vvi15g0286 270 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 57 251 IPR045073 -
Vvi15g0286 270 Gene3D Glutaredoxin 47 129 - -
Vvi15g0286 270 SUPERFAMILY Thioredoxin-like 56 128 IPR036249 -
Vvi15g0286 270 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 131 255 IPR010987 -
Vvi15g0286 270 CDD GST_C_Tau 133 253 IPR045074 GO:0004364|GO:0006749
Vvi15g0286 270 Gene3D - 131 266 - -
Vvi15g0286 270 SUPERFAMILY GST C-terminal domain-like 120 259 IPR036282 -
Vvi15g0286 270 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 47 126 IPR004045 -
Vvi15g0286 270 Pfam Glutathione S-transferase, C-terminal domain 162 239 IPR004046 -
Vvi15g0286 270 FunFam Tau class glutathione S-transferase 128 265 - -
Vvi15g0286 270 SFLD Glutathione Transferase (cytosolic) 55 264 IPR040079 -
Vvi15g0286 270 Pfam Glutathione S-transferase, N-terminal domain 56 120 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0286 Vvi-Chr15 8191592 8193304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0286 59 264 Glutathione S-transferase Gene Family AT3G09270 45.673 2.43e-58 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0286 K00799 - vvi:100265481 329.331