Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0226 ATGGTTGAGTCCTTATTTTCAGTAGTTATGGTCATGAGAGTAGGAGAAGAGAAGTTAACTGACCTGCTTTCCCAGGAAGCATTTCTACTCAGCAGAGTAGAAGAGCAGGTGAAGCTGTTGAGTAACGAGCTCGAATGGATGCGCCTTTTTCTCAAAGACGCGGATGCGAAGCGCAGATATGATCCAAGAATCAAGCTCTGGGTGAGTCAGATCAGGGACGTAACCTATGACGCCGAAGATGTCATCGACAGGTTCATGTTCGAGATGAATCACCAACAGCAAGGAAGTCTCAAATGCCTCAAGTTCCTTAAGTTACGATTTGTTCACAAGCTCGAGTCTCGAATCAGAGAGATCAATATCAAGATTGAGAAGATCATGGCTAACAAATCAAGGTACGGTGTCGAAACCTTACCAGCTGCAAGCTCGTCCAACGAAGTTGTGCCACATAAAGAGAGGAGGGCTCCGATTGTGGAAGAAGTAAACGTGGTGGGAATTCAAGAGGATGCAAAAAGCGTTAAGCAAAATCTGCTTAATGGAGAGATGCGGAGAGCTGTGGTGTCCATCGTGGGCATGGGTGGCTTGGGAAAGACTACCCTGGCTAAGAAAGTCTATAATGATAATGATGTCCGGCAATGCTTTGATTGTCATGCTTGGATTTATGTCTCTCAAGAGTATACAATCAGGGAGCTTTTGCTAGGCGTTGCTGTTTGTGTTAGGATTCTCTCCGAAGAGGAAAGGAGTAAAATGAACGAGAGCGATTTGGGGAATAGTCTTCGTGATTACCTGACTACCAGGAAGTACTTGATAGTTATGGATGATATGTGGAGAAATGAAGCTTGGGATAGGTTGGGCTTGTATTTTCCTGACTCGGTGAATGGCAGCAGAGTGTTGATCACCTCACGCAATAAAGAGATTGGTCTTTATGCTGATCCACAAACCATTCCCCATGAACTTTCTTTTCTGACTGAAGAAGAGAGTTGGGAGCTCTTTCTCAAGAAAATTTTTCTGGCTGGGAGTGCAAATGCTGAGAGAATTTTAACCATGCCGCACCTCATGCCTTTCTCAGACCACACTTACCTTTACCATCTAAGTTTAAGAGGAAGGCTCGAAAGGTTCCCTGATGAAATTGAATTCTACCCTCCAAACCTCGTCTCCTTGGAATTGGAATGTTGGAATATAGAGCAAGACCCAATGGTGACCCTAGAGAAGCTGCCAAACTTGAGATTTCTCAGATTATTCCATTGTTCCTCTATGTTAAAGAAGATGGTCTGTACTTCTGGAGGATTCCAGCAACTCGAAACCCTTAAGCTCTGGAATTTGAAAGAATTAAAAGAATTGATTGCGGAGGAAGGGGCAATGCCTGATCTGAAGGATTTAGTAATTGATACTTGCCCTAAAATGAAAAGGCTTTCCCATGGATTGCTGCAACGAAAAAATTTGCAGAACCTAAGTTTGTATGATTTGTCTCCTGAGTTAATGGATGAGCTTTCTCGGATAGAAGGAGATCTGGAGAAGATCTGCCTCGCCACCTCAATACACGGGTGGAGGCGTACGGCATCTTGA 1563 0.4402 MVESLFSVVMVMRVGEEKLTDLLSQEAFLLSRVEEQVKLLSNELEWMRLFLKDADAKRRYDPRIKLWVSQIRDVTYDAEDVIDRFMFEMNHQQQGSLKCLKFLKLRFVHKLESRIREINIKIEKIMANKSRYGVETLPAASSSNEVVPHKERRAPIVEEVNVVGIQEDAKSVKQNLLNGEMRRAVVSIVGMGGLGKTTLAKKVYNDNDVRQCFDCHAWIYVSQEYTIRELLLGVAVCVRILSEEERSKMNESDLGNSLRDYLTTRKYLIVMDDMWRNEAWDRLGLYFPDSVNGSRVLITSRNKEIGLYADPQTIPHELSFLTEEESWELFLKKIFLAGSANAERILTMPHLMPFSDHTYLYHLSLRGRLERFPDEIEFYPPNLVSLELECWNIEQDPMVTLEKLPNLRFLRLFHCSSMLKKMVCTSGGFQQLETLKLWNLKELKELIAEEGAMPDLKDLVIDTCPKMKRLSHGLLQRKNLQNLSLYDLSPELMDELSRIEGDLEKICLATSIHGWRRTAS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0226 520 SUPERFAMILY L domain-like 349 487 - -
Vvi15g0226 520 Gene3D Ribonuclease Inhibitor 313 506 IPR032675 -
Vvi15g0226 520 Gene3D - 146 310 IPR027417 -
Vvi15g0226 520 Gene3D - 12 125 - -
Vvi15g0226 520 FunFam Probable disease resistance protein At1g61300 146 312 - -
Vvi15g0226 520 Pfam Rx N-terminal domain 17 98 IPR041118 -
Vvi15g0226 520 PRINTS Disease resistance protein signature 430 446 - -
Vvi15g0226 520 PRINTS Disease resistance protein signature 185 200 - -
Vvi15g0226 520 PRINTS Disease resistance protein signature 261 275 - -
Vvi15g0226 520 Coils Coil 108 128 - -
Vvi15g0226 520 CDD RX-CC_like 17 125 IPR038005 -
Vvi15g0226 520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 338 IPR027417 -
Vvi15g0226 520 Pfam NB-ARC domain 167 343 IPR002182 GO:0043531
Vvi15g0226 520 PANTHER TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOG 12 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0226 Vvi-Chr15 6043582 6049752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0226 186 330 WRKY Transcription Factor Family AT5G45050 32.000 5.16e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0226 - - vvi:100257205 638.647