Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0164 ATGATCTTCTCGTCTGATCTCCCACTTGTAGGTTCCTTCATAGCAGTCTTTCTCATAACCCGTTTTATGTGTTTTTCTGATTATAAGACACGTTTTTTCTTGCCAAGAACATCCAAAGCAACCATTTTAGTGGCATTATCCCTAGTTGGGACCACTTGTGGGACACGTGGCAGTAGACCCTCCATTCTGTTGGTAGATTTCAGAGAAAGACAGAGAAAACCCAGAGAGCAGGAGGCTCCTTTGGCAGTGTGGGTGTTGGAGAGGGTGAAGTCTTGGTGGAGTTTTTCTAAGTGGTCTGAGAGAGGGAATTTTAAAGAGAGTGACAGGGGTATCCATTTCAGAGGGGAAGCTACGGTTTTGTTGGTCCTAGAGGAAGAGAGAGCGTTGGAAGCTGAGCAAGCTTTGCTTGAGAGGCTCAGGCCATGGGGTCAGAATTTAAAATCCATTGGGTTTGGGGAGATTGCGAGAGAAGGGTGGGGTGAGTTTCATTCACCACCTGATGCTTTCAAAGTAGATTGTGAAGGCAGTGAGGTCCGGGTTCAGACTGAGACTACCTTTGCTAGAGATCTGTCAGATGGATATCCCAAGTTTGTTAAAGCTGAAGGAGCTTTGGGATTGTACAAATGTCTTGTTCCTTTTTGGGGATGTCAGATTCCATATGCATTGATCAAATTTGCTTCTTTTGGGATCATTATTGAGTACAAGGATGCCATTCCTACTCTGAAGGATCAGTGCAATAGAAGTCTGCAGCTTGGTGTAAGCTTTGCTGATAGATATGGCTGGTGTTTTCTGCTCTATTGTTTCTCATTCAGCTGA 816 0.4461 MIFSSDLPLVGSFIAVFLITRFMCFSDYKTRFFLPRTSKATILVALSLVGTTCGTRGSRPSILLVDFRERQRKPREQEAPLAVWVLERVKSWWSFSKWSERGNFKESDRGIHFRGEATVLLVLEEERALEAEQALLERLRPWGQNLKSIGFGEIAREGWGEFHSPPDAFKVDCEGSEVRVQTETTFARDLSDGYPKFVKAEGALGLYKCLVPFWGCQIPYALIKFASFGIIIEYKDAIPTLKDQCNRSLQLGVSFADRYGWCFLLYCFSFS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0164 271 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 173 256 IPR044677 GO:0005315|GO:1990547
Vvi15g0164 271 SUPERFAMILY Mitochondrial carrier 178 234 IPR023395 -
Vvi15g0164 271 ProSiteProfiles Solute carrier (Solcar) repeat profile. 143 234 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0164 Vvi-Chr15 4572782 4574196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0164 174 259 Chloroplast and Mitochondria Gene Families AT5G14040 60.227 4.02e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0164 K15102 - rcu:8273124 120.168