Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0138 ATGGAACATTTGTATAACCTTCGTTTAAGTGGAATGGTCATAACAGAGCTGCCATCATCAATTGAACGTCTGACAAATCTTGCAGACTTGGAATTGACCAATTGTGAGAACCTTGTGACTCTTCCAAACAGCATTGGTAATTTGACAGGTCTTGTGACTCTTCGTGTTCGTAACTGTTCAAAGCTCCACAAATTGCCTGACAATTTGAGAAGCCTACAACATTGCAATCTGATGGAAGGAGCAATCCCCAATGATTTATGGCGCCTATCCTCACTAGAATTTTTAGATGTGAGCGAAAACCATATTCATCGCATACCTGCTGGCAGCATTCAACTTTCTAACTTGACAGAACTTCACATGAATCATTGCCTGATGCTTGAAGAAATTCACAAGCTTCCATCAAGTCTAAGAGTCATAGAAGCACATGGTTGTCCATGTCTGGAAACTTTATTAAGTGATCCAACACATCTATTCTGGTCATATCTTCTCAACTGCTTCAAATCACAAACTGAGGAAGCAGTGGAATACCAGAGTGGGTAA 540 0.4037 MEHLYNLRLSGMVITELPSSIERLTNLADLELTNCENLVTLPNSIGNLTGLVTLRVRNCSKLHKLPDNLRSLQHCNLMEGAIPNDLWRLSSLEFLDVSENHIHRIPAGSIQLSNLTELHMNHCLMLEEIHKLPSSLRVIEAHGCPCLETLLSDPTHLFWSYLLNCFKSQTEEAVEYQSG* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0138 179 SUPERFAMILY L domain-like 3 166 - -
Vvi15g0138 179 Gene3D Ribonuclease Inhibitor 1 175 IPR032675 -
Vvi15g0138 179 PANTHER LEUCINE-RICH REPEAT-CONTAINING 6 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0138 Vvi-Chr15 3693194 3693863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0138 7 118 WRKY Transcription Factor Family AT4G12020 34.821 5.02e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0138 - - vri:117905837 258.84