Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0133 ATGGCGGAAGAAGTGAAACTTTTCAGAACATGGTCAACTCCTTTTGCTCTGAGGATTGTTTGGGCTCTCAAAATCAAAGGCGTTGAGTATGAAACCATATTTGAAGATCTCTACAACAAGAGCCCTTCACTTCTCCAGTATAATCCTGCCCACAAAAAGGTTCCAGTTCTTGTACACAATGGAAAACCGATCTCTGAATCGTATGTCATTCTTGAATACATTGATGAGACATGGAAGGAAACTCCCTTGTTGCCTGAAGACCCTTACGAGAGAGCCATGGCCCGCTTCTGGGCCAAATTTGGTGATGATAAGGTTTTTACATCAATTTTTGGGGGTGTCTTCGTCAAGGAAGGTAAAGAGCAGGAGGAAGCTATGGTTGAAGCCATGGAGAACCTCCAGTTCTTGGAAGAAGAACTCAGGGGAAAGAAGTTCTTTGGTGGAGAAAGGATTGGGTTTGTTGATCTTGCATTGGGTTGGCTTGCTAACTTGATCAGCATATTGGAAGATGTAGCTGGCCTGAAAATTGTGGGTGAAGACAAGTTTCCATTGTTGTCGGCGTGGATGAAAGACTTTGCGGATTCTCCAATAATCAAGGACAACTGGCCACCTCGAGACAAGATGATTGCCAAGTTCCAGGCCCTTCGTGATGCCAAACTTGCAGCAGCAGCATCTAAATGA 678 0.4454 MAEEVKLFRTWSTPFALRIVWALKIKGVEYETIFEDLYNKSPSLLQYNPAHKKVPVLVHNGKPISESYVILEYIDETWKETPLLPEDPYERAMARFWAKFGDDKVFTSIFGGVFVKEGKEQEEAMVEAMENLQFLEEELRGKKFFGGERIGFVDLALGWLANLISILEDVAGLKIVGEDKFPLLSAWMKDFADSPIIKDNWPPRDKMIAKFQALRDAKLAAAASK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0133 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Vvi15g0133 225 SFLD Main.3: Omega- and Tau-like 2 222 IPR045073 -
Vvi15g0133 225 FunFam Tau class glutathione S-transferase 84 221 - -
Vvi15g0133 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 211 IPR010987 -
Vvi15g0133 225 Gene3D - 84 223 - -
Vvi15g0133 225 SFLD Main (cytGST) 2 222 - -
Vvi15g0133 225 CDD GST_C_Tau 88 214 IPR045074 GO:0004364|GO:0006749
Vvi15g0133 225 CDD GST_N_Tau 5 78 - -
Vvi15g0133 225 Pfam Glutathione S-transferase, C-terminal domain 116 195 IPR004046 -
Vvi15g0133 225 Gene3D Glutaredoxin 1 83 - -
Vvi15g0133 225 FunFam Tau class glutathione S-transferase 1 86 - -
Vvi15g0133 225 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Vvi15g0133 225 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Vvi15g0133 225 Coils Coil 118 138 - -
Vvi15g0133 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi15g0133 225 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0133 Vvi-Chr15 3425178 3425978 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0133 2 213 Glutathione S-transferase Gene Family AT2G29420 50.235 8.18e-70 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0133 K00799 - vvi:100245369 436.417