Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0131 ATGGCGGAAGAAGTGAAACTTTTCAGAACATGGTCAAGTCCTTTTGCTCTGAGGATTGTTTGGGCTCTCAAAATCAAAGGCGTAGAGTATGAAACCATATTTGAAGATCTCTCCAACAAGAGCCCTTCACTTCTCCAGTATAATCCTACCCACAAAAAGGTTCCAGTTCTTGTACACAATGGAAAACCGATCGCTGAATCGTATGTCATTCTTGAATACATTGATGAGACATGGAAGGAAACTCCCTTGTTGCCTGAAGACCCTTACGAGAAAGCCATGGCCCGCTTCTGGGCCAAATTTGGTGATGATAAAGGTAAAGAGCAGGAGGAAGCTATGGTTGAAGCCATGGAGAACCTCCAGTTCTTGGAAGAAGAACTCAGGGGAAAGAAGTTCTTTGGTGGAGAAAGGATTGGGTTTGTTGATCTTGCATTGGGTTGGCTTGCTAACTTGATCAGCATATTGGAAGATGTAGCTGGCCTGAAAATTGTGGGTGAAGACAAGTTTCCATTGTTGTCGACGTGGATGAAAGACTTTGCGGATTCTCCAATAATCAAGGACAACTGGCCACCTCGAGACAAGATGATTGCCAAGTTCCAGGCCCTTCGTGATGCCAAACTTGCAGCAGCAGCATCTAAATGA 639 0.446 MAEEVKLFRTWSSPFALRIVWALKIKGVEYETIFEDLSNKSPSLLQYNPTHKKVPVLVHNGKPIAESYVILEYIDETWKETPLLPEDPYEKAMARFWAKFGDDKGKEQEEAMVEAMENLQFLEEELRGKKFFGGERIGFVDLALGWLANLISILEDVAGLKIVGEDKFPLLSTWMKDFADSPIIKDNWPPRDKMIAKFQALRDAKLAAAASK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0131 212 Coils Coil 105 125 - -
Vvi15g0131 212 SUPERFAMILY Thioredoxin-like 5 103 IPR036249 -
Vvi15g0131 212 Pfam Glutathione S-transferase, C-terminal domain 102 182 IPR004046 -
Vvi15g0131 212 SFLD Main (cytGST) 2 209 - -
Vvi15g0131 212 FunFam Tau class glutathione S-transferase 84 208 - -
Vvi15g0131 212 CDD GST_N_Tau 5 78 - -
Vvi15g0131 212 Gene3D Glutaredoxin 1 83 - -
Vvi15g0131 212 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Vvi15g0131 212 CDD GST_C_Tau 88 201 IPR045074 GO:0004364|GO:0006749
Vvi15g0131 212 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 194 IPR045073 -
Vvi15g0131 212 Gene3D - 84 210 - -
Vvi15g0131 212 FunFam Tau class glutathione S-transferase 1 86 - -
Vvi15g0131 212 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi15g0131 212 SUPERFAMILY GST C-terminal domain-like 76 203 IPR036282 -
Vvi15g0131 212 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 60 198 IPR010987 -
Vvi15g0131 212 SFLD Main.3: Omega- and Tau-like 2 209 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0131 Vvi-Chr15 3392502 3393271 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0131 2 200 Glutathione S-transferase Gene Family AT2G29420 49.057 5.45e-67 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0131 K00799 - vvi:109121543 399.823