Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0128 ATGGAACTTGTAAGCAGAAGAAACGATGTTATAGGGCTGTTGAATTCCTTCACGCAGTTTGATTCGGGGTCAGCTGGATCAGTCACAGCTCCGCTAGTGGTGATTCAGACTACCAAGTTTGACTGTGAAGGACTAGCCATTGGCATAAGCATCTGCCACGCCATTGCCGATGGATTCACAATGGTCCATTTCGTTACTGCTTGGGCAACCGCGAATAGAGCAGGAATAAATCAATCAACTCGATCAGATTTCAACTTGGCTTCTCTCTGCCCGGCAAAAGATTTTCCTGTTGTTAAGCCTGATCGTCCCCTAGAATCCTAG 321 0.4673 MELVSRRNDVIGLLNSFTQFDSGSAGSVTAPLVVIQTTKFDCEGLAIGISICHAIADGFTMVHFVTAWATANRAGINQSTRSDFNLASLCPAKDFPVVKPDRPLES* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0128 106 Pfam Transferase family 24 98 - -
Vvi15g0128 106 Gene3D - 2 106 IPR023213 -
Vvi15g0128 106 PANTHER F21J9.9 19 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0128 Vvi-Chr15 3331871 3332191 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0128 24 74 Monolignol Biosynthesis Gene Families AT5G48930 41.176 2.64e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0128 - K13065 vri:117932009 169.088