Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0122 ATGGCAGAAGAAGTGAAACTTTTCAGAACATGGTCAAGTCCTTTTGCTCTCAGGGCTGTCTGGGCTCTCAAAATCAAAGGCATAGATTATGAAACCATATTTGAAGATCTCTCCAACAAGAGCCCTTCACTTCTCCAATATAATCCTGTCTACAAAAAGGTTCCAGTGCTTGTACACAAAGGAAAACCCATCGCTGAATCGCTTGTCATTCTGGAATACATTGATGAGACATGGAAGCAGGCTCCCTTATTGCCTGAAGACCCTCATGAGAGAGCCACGGCACGTTTCTGGGCAAAATTTGGCGAAGATAAGGTTTTGACATCAATTTGGAGCGTCTTTATCAAGCAAGGGAAAGAGCAGGAGGAAGCTATGGTTCCAGCCCTGGAGAACCTCAAGTTCCTGGAAGAAGAGTTGAAGGGAAAGAAGTTCTTTGGCGGAGAGACCATTGGGTTTGTTGATCTTGCCTTGGGTTGGCTTGGTAACTTGATCAGCATATTGGAAGAGATTGTTGGGCTGAAAGTTGTGGATGGGGAGAAGTTTCCATTGTTGTCCGCATGGATGCAAGATTTTGCAGATGCTCCAATCATTAAAGACAACTGGCCACCTCGAGACAGAATGATTGTCAAATTCCAAGCCCTTCGTGATGCCACCATTGCAGCAGCGGCAGCAGCAGCAACATCAAAATGA 687 0.4541 MAEEVKLFRTWSSPFALRAVWALKIKGIDYETIFEDLSNKSPSLLQYNPVYKKVPVLVHKGKPIAESLVILEYIDETWKQAPLLPEDPHERATARFWAKFGEDKVLTSIWSVFIKQGKEQEEAMVPALENLKFLEEELKGKKFFGGETIGFVDLALGWLGNLISILEEIVGLKVVDGEKFPLLSAWMQDFADAPIIKDNWPPRDRMIVKFQALRDATIAAAAAAATSK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0122 228 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Vvi15g0122 228 FunFam Tau class glutathione S-transferase 1 86 - -
Vvi15g0122 228 SFLD Glutathione Transferase (cytosolic) 2 220 IPR040079 -
Vvi15g0122 228 CDD GST_N_Tau 5 78 - -
Vvi15g0122 228 Gene3D Glutaredoxin 1 83 - -
Vvi15g0122 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 210 IPR010987 -
Vvi15g0122 228 FunFam Tau class glutathione S-transferase 84 220 - -
Vvi15g0122 228 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Vvi15g0122 228 Gene3D - 84 222 - -
Vvi15g0122 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi15g0122 228 Pfam Glutathione S-transferase, C-terminal domain 105 192 IPR004046 -
Vvi15g0122 228 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Vvi15g0122 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 206 IPR045073 -
Vvi15g0122 228 CDD GST_C_Tau 88 213 IPR045074 GO:0004364|GO:0006749
Vvi15g0122 228 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0122 Vvi-Chr15 3085355 3086129 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0122 2 212 Glutathione S-transferase Gene Family AT2G29420 47.867 9.82e-67 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0122 K00799 - vvi:100254124 419.853