Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0117 ATGGGAAGCTATGGAGGGGGGCAGCTGAAAAACAGAGAAAAGAAAATCAGGGTGAAGAGCAGAGGAAAGTGGTTTAGCTGGTTCACTGGTTTTGCTGATTTTGGAGGAGGATTCCCATTAGGGGAGTATAGAAAAACTCGCAATTTGCAAAGGGTTCATGTTGTGCTTTTTGAAGAACACGGGTGGTTGTTTTTTGGGATATATGATGGTTTTAGTGGCCCAGAAGCACCAGTTTCTTTTTTTATGAGCCATCTGTATAAAGTGATAAACAAAGAATTGGAAAGACTACTCTGGGATTATGAAGCAAAGTCTGTGAATGATCTACTGAATCTCGAATTCCCCATGAATAGAGATGCTGCAGCTTATTCTGAATACACAAAGGAGAACCCTCTGATTTCCCATTCCACTTGGGGTGCATTCACATGGTCATGGCATGATTCGTCTTATTGGAATGACTTTGAATGGGATGATAGGAATGTGAAGGCTAATAATGTTCATGGGAATCTCTATGGAACCAGTATTGAAGCTGTTGCGGAGATTGGAAAGCAGATGCAAGAAATAAGAACACCAGTCTTCATCAGCTTGTCTGGTGTCAATAACCTGTGGTCAAGCGAATCTAATTGTACCTATTCCAGCGATTCGCAAACAGCAGATGGGACATCTCTCCATAGACACTCAAGTAGTGGTGGTGGTATACCTCCATACCTGTACGTGTTCCCACCAGCCTTGGTCTCCACTCTTCATCCATTTCTTTGTCCAGTCTCTTCTCTCATCCTCTCAACCAGCTGGGCAGGAGAATTGGAGCTTCATGGAGACGATACAGTCAGTTAA 831 0.432 MGSYGGGQLKNREKKIRVKSRGKWFSWFTGFADFGGGFPLGEYRKTRNLQRVHVVLFEEHGWLFFGIYDGFSGPEAPVSFFMSHLYKVINKELERLLWDYEAKSVNDLLNLEFPMNRDAAAYSEYTKENPLISHSTWGAFTWSWHDSSYWNDFEWDDRNVKANNVHGNLYGTSIEAVAEIGKQMQEIRTPVFISLSGVNNLWSSESNCTYSSDSQTADGTSLHRHSSSGGGIPPYLYVFPPALVSTLHPFLCPVSSLILSTSWAGELELHGDDTVS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0117 276 Gene3D - 43 186 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0117 Vvi-Chr15 2989408 2990872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0117 25 110 PP2C-type Phosphatase Gene Family AT2G46920 54.167 3.00e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0117 - - vvi:100262441 135.961