Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0105 ATGTATGGTTTGACATCAATTCAAAGTGTGTTTATCACACGAGGGAAAGAGCTGGAGGAAGCCATGGAGTACCTGAAGTTCTTGGAAGAAAAGTTGAAGGGAAAAATGTCCTTTGCTGGAGAGACGATCATGTTTCTTGACCTTGCCTTGGGTTGGCTTGCTAACTTGATTAGCATATTGGAAGAGATTTTTGGCTTAAAAGTTGGGGAAGAGGAGAAATTTCCATTGTTGTCTCCATGGACACAAGATTTTGCAGATTCTCCAATCATTAAAGGCAACTGGCCACATTGA 291 0.4124 MYGLTSIQSVFITRGKELEEAMEYLKFLEEKLKGKMSFAGETIMFLDLALGWLANLISILEEIFGLKVGEEEKFPLLSPWTQDFADSPIIKGNWPH* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0105 96 Gene3D - 3 96 - -
Vvi15g0105 96 Pfam Glutathione S-transferase, C-terminal domain 16 88 IPR004046 -
Vvi15g0105 96 CDD GST_C_Tau 9 96 IPR045074 GO:0004364|GO:0006749
Vvi15g0105 96 SUPERFAMILY GST C-terminal domain-like 16 95 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0105 Vvi-Chr15 2716860 2717150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0105 14 95 Glutathione S-transferase Gene Family AT3G09270 40.244 8.44e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0105 K00799 - vvi:100254124 135.576