Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0095 ATGACGAAACTACACTTTTCTGTTCCTATAATTACACCTCCCCTTCTAGGCCTCCTCCTCATCACTTTACCCTTGCTCGTAATTTCACAAAATCTGGATGCTGAACTATCCATTCTGTTGCAAGTCAAACAACAATTGGGCAATCCACCCTCTATCCAATCGTGGAACTCATCATCCTCACCTTGTGATTGGCCGGAAATTACATGCACCGACAATACCATCACTGAAATTTCACTCTACGGCAAGAGCATCACTCACAAAATTCCTGCCAGAATTTGTGACCTCAAGAACCTTATGGTACTTGACGTCTCCAACAATTACATTCCCGGCGAGTTCCCGGATATTCTCAATTGTTCTAAGCTCGAATATCTCCTCTTGTTGCAAAACAACTTCGTGGGTCCAATTCCAGCTAATATTGATCGGCTTTCACGTCTCCGGTACCTAGACCTTACCGCAAACAACTTCTCTGGAGATATTCCCGCAGTAATTGGGCAACTACGGGAGCTGTTCTACTTGTCTCTGGTTCAAAATGAGTTCAACGGCACCTGGCCAAAGGAGATTGGTAATTTGGCGAATCTTCAACACTTGGCCATGGCCTATAATGACAAATTCCTGCCTTCAGCCCTTCCAAAGGAGTTTGGCGCATTGAAGAAGCTGACGTATCTGTGGATGACGGATGCAAATTTGGTCGGCGAAATACCTGAGAGCTTCAACAATTTGTCGAGTCTGGAACTCTTGGATCTCGCAAACAACAAATTGAACGGTACGATCCCGGGAGGCATGCTTATGTTGAAGAATTTGACCTATTTGTATTTATTCAATAATAGATTGTCCGGCCACATTCCTTCATTGATAGAAGCTCTCAGCTTGAAAGAAATTGATCTTTCCGACAACTATATGACGGGGCCGATTCCAGCGGGTTTCGGGAAGCTACAAAATTTGACGGGTTTGAATCTTTTCTGGAATCAGTTGTCAGGAGAGATACCAGCAAATGCAAGCCTCATTCCTACACTGGAAACCTTCAAAATTTTTAGCAATCAATTGAGTGGAGTTTTGCCTCCAGCATTTGGCCTTCATTCGGAGCTTCGACTCTTTGAGGTTTCCGAGAATAAACTAAGTGGAGAATTACCTCAACATTTATGCGCTAGGGGGGCTTTGCTTGGAGTGGTTGCTTCCAACAACAATCTCAGTGGGGAAGTGCCCAAGTCCCTCGGGAATTGCACAAGTTTGCTCTCAATTCAGCTTTCCAACAACAATCTCAGCGGGGAAGTGCCCAAGTCCCTCGGGAATTGCACAAGTTTGCGCTCAATTCAGCTTTCCAACAATCGCTTTTCAGGCGAGATTCCTTCCGGCATCTGGACATCCTCGGACATGGTATCGGTGATGTTAGACGGAAATTCATTCTCGGGGACACTTCCAAGCAAATTGGCAAGGAATTTGTCCAGAGTGGACATCAGTAACAACAAGTTTTCTGGTCCAATTCCTGCTGGAATATCATCTTTGTTGAATCTATTGTTGTTCAAGGCAAGCAATAATCTATTTTCAGGAGAAATTCCAGTGGAATTGACGAGTCTTCCATCCATATCTACTCTGTCGCTTGATGGGAATCAATTGTCAGGCCAACTTCCTCTTGATATTATCTCCTGGAAGTCACTATTTGCTTTGAATTTGTCAACAAATTATCTCTCTGGCCCAATTCCAAAGGCCATTGGATCTTTGCCTAGCCTCGTGTTTCTTGACTTATCTGAAAACCAATTCTCAGGCGAAATCCCCCATGAATTCAGTCATTTCGTGCCTAATACCTTTAACCTTTCATCCAACAATCTATCTGGGGAAATCCCACCCGCCTTTGAAAAGTGGGAATACGAAAACAATTTCTTGAATAATCCCAATCTGTGTGCCAATATTCAAATTCTGAAGAGTTGCTACTCTAAAGCCAGTAACTCCTCTAAATTGTCAACCAATTACCTAGTCATGATTATATCTTTCACCCTAACTGCTTCCCTGGTTATCGTACTTCTTATCTTTTCCATGGTTCAAAAGTATCGAAGGAGGGACCAAAGGAACAATGTTGAAACATGGAAGATGACATCCTTCCATAAGTTAAATTTCACTGAATCCAACATATTGTCGCGTTTGGCACAAAATAGTTTAATTGGAAGTGGGGGGTCAGGGAAGGTATATCGTACCGCCATTAACCATTCTGGTGAAGTGGTCGCTGTTAAATGGATTTTGACTAATAGGAAACTAGGCCAGAACCTCGAGAAGCAATTCGTAGCAGAAGTCCAAATATTAGGTATGATACGCCATGCCAATATAGTGAAGTTGCTATGCTGCATTTCAAGTGAAAGCTCAAATCTTCTTGTTTATGAGTACATGGAGAACCAAAGCTTAGATAGATGGCTTCATGGTAAGAAGAGGGCAGTGTCCTCAATGGATTCAGGAAGTGATGTTGTCTTGGACTGGCCGATGAGGCTGCAAATTGCCATTGGAGCTGCTCGAGGCCTATGCTATATGCACCATGATTGCTCTCCCCCAATCATTCATCGAGATGTGAAGTCCAGCAACATCTTATTGGACTCTGAATTTAATGCAAAAATTGCAGATTTTGGATTGGCCAAAATGTTAGCCAAGCAAGTAGAAGACCCTGAAACAATGTCTGTGGTTGCAGGCACTTTCGGATATATTGCTCCAGAGTATGCTTATACAAGAAAGGCGAATAAGAAGATCGACGTCTACAGTTTTGGAGTTGTGCTTCTAGAGTTGGCCACTGGAAGAGAAGCCAATAGGGGGAACGAGCATATGAACCTTGCTCAATGGGCCTGGCAGCACTTTGGAGAGGGAAAATTCATTGTGGAAGCCTTGGATGAGGAGATCATGGAAGAATGCTATATGGAAGAAATGAGCAATGTGTTCAAACTAGGCCTCATGTGTACTAGCAAAGTACCTTCTGACAGGCCTTCCATGAGGGAGGTATTGCTAATTCTTGATCGATGTGGTCCTCAGCAAGGTCATGCTACATAA 3024 0.4335 MTKLHFSVPIITPPLLGLLLITLPLLVISQNLDAELSILLQVKQQLGNPPSIQSWNSSSSPCDWPEITCTDNTITEISLYGKSITHKIPARICDLKNLMVLDVSNNYIPGEFPDILNCSKLEYLLLLQNNFVGPIPANIDRLSRLRYLDLTANNFSGDIPAVIGQLRELFYLSLVQNEFNGTWPKEIGNLANLQHLAMAYNDKFLPSALPKEFGALKKLTYLWMTDANLVGEIPESFNNLSSLELLDLANNKLNGTIPGGMLMLKNLTYLYLFNNRLSGHIPSLIEALSLKEIDLSDNYMTGPIPAGFGKLQNLTGLNLFWNQLSGEIPANASLIPTLETFKIFSNQLSGVLPPAFGLHSELRLFEVSENKLSGELPQHLCARGALLGVVASNNNLSGEVPKSLGNCTSLLSIQLSNNNLSGEVPKSLGNCTSLRSIQLSNNRFSGEIPSGIWTSSDMVSVMLDGNSFSGTLPSKLARNLSRVDISNNKFSGPIPAGISSLLNLLLFKASNNLFSGEIPVELTSLPSISTLSLDGNQLSGQLPLDIISWKSLFALNLSTNYLSGPIPKAIGSLPSLVFLDLSENQFSGEIPHEFSHFVPNTFNLSSNNLSGEIPPAFEKWEYENNFLNNPNLCANIQILKSCYSKASNSSKLSTNYLVMIISFTLTASLVIVLLIFSMVQKYRRRDQRNNVETWKMTSFHKLNFTESNILSRLAQNSLIGSGGSGKVYRTAINHSGEVVAVKWILTNRKLGQNLEKQFVAEVQILGMIRHANIVKLLCCISSESSNLLVYEYMENQSLDRWLHGKKRAVSSMDSGSDVVLDWPMRLQIAIGAARGLCYMHHDCSPPIIHRDVKSSNILLDSEFNAKIADFGLAKMLAKQVEDPETMSVVAGTFGYIAPEYAYTRKANKKIDVYSFGVVLLELATGREANRGNEHMNLAQWAWQHFGEGKFIVEALDEEIMEECYMEEMSNVFKLGLMCTSKVPSDRPSMREVLLILDRCGPQQGHAT* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0095 1007 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Vvi15g0095 1007 Gene3D Transferase(Phosphotransferase) domain 1 793 1005 - -
Vvi15g0095 1007 Gene3D Ribonuclease Inhibitor 289 645 IPR032675 -
Vvi15g0095 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Vvi15g0095 1007 Gene3D Phosphorylase Kinase; domain 1 679 792 - -
Vvi15g0095 1007 Gene3D Ribonuclease Inhibitor 32 204 IPR032675 -
Vvi15g0095 1007 SMART LRR_typ_2 142 166 IPR003591 -
Vvi15g0095 1007 SMART LRR_typ_2 264 288 IPR003591 -
Vvi15g0095 1007 SMART LRR_typ_2 525 549 IPR003591 -
Vvi15g0095 1007 SMART LRR_typ_2 95 118 IPR003591 -
Vvi15g0095 1007 SMART LRR_typ_2 573 596 IPR003591 -
Vvi15g0095 1007 SMART LRR_typ_2 311 335 IPR003591 -
Vvi15g0095 1007 SMART LRR_typ_2 240 263 IPR003591 -
Vvi15g0095 1007 SMART LRR_typ_2 431 455 IPR003591 -
Vvi15g0095 1007 FunFam Kinase family with leucine-rich repeat domain-containing protein 695 792 - -
Vvi15g0095 1007 FunFam Predicted protein 288 380 - -
Vvi15g0095 1007 SMART serkin_6 713 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0095 1007 SUPERFAMILY Protein kinase-like (PK-like) 704 996 IPR011009 -
Vvi15g0095 1007 FunFam Uncharacterized protein 208 287 - -
Vvi15g0095 1007 ProSiteProfiles Leucine-rich repeat profile. 266 288 IPR001611 GO:0005515
Vvi15g0095 1007 SUPERFAMILY L domain-like 42 377 - -
Vvi15g0095 1007 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Vvi15g0095 1007 ProSiteProfiles Protein kinase domain profile. 713 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0095 1007 Pfam Protein kinase domain 715 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0095 1007 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 264 997 - -
Vvi15g0095 1007 FunFam Kinase family with leucine-rich repeat domain-containing protein 793 1007 - -
Vvi15g0095 1007 SUPERFAMILY RNI-like 304 632 - -
Vvi15g0095 1007 Gene3D Ribonuclease Inhibitor 205 288 IPR032675 -
Vvi15g0095 1007 FunFam Leucine-rich repeat receptor protein kinase EMS1 381 475 - -
Vvi15g0095 1007 FunFam Receptor-like protein kinase HSL1 32 186 - -
Vvi15g0095 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 519 642 - -
Vvi15g0095 1007 Pfam Leucine rich repeat 219 277 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0095 Vvi-Chr15 2431563 2434683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0095 22 1007 Receptor kinase-like Gene Family AT5G25930 52.314 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi15g0095 Pkinase 7.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0095 K00924 - vvi:100252254 1944.86