Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0063 ATGGTGGGGGAGTCAAGGAGATGGATGATACTGGTGGCAACAACATGGATTCAGGCCTTCACAGGAACAAACTTAGACTTCTCATCATACTCTTCACATCTGAAATCAGTGCTGGGGATTTCACAGCTTCAACTCAACTATCTCTCTGTGGCATCTGATCTGGGCAAGGCTTTTGGGTGGTGTTGTGGGGTCTCTCTCTTCTATTTGCCTCTCTGCCTCCTCCTCTTCATGGCTGCTTTCATGGGTCTCCTTGGCTATGGCCTCCAATGGCTCCTCATCCAAAGACTCATCTCTTTGCCTTATGTTCTGGTTTTTCTTATCTGCCTGTTGGCTGGGTGTAGCATCTCCTGGTTCAACACCCTCTGTTATGTCCTATGCATCCAACATTTTCCCAGCAATCGACCACTGGCATTATCCCTAACCACTGGTTTCAATGGTGTAAGTGCAGCATTATACACCCTCATTGCCAATGCCATAAACCCTCACAATGACAGCCTCTACCTCTCCCTAAATGCCCTAGTTCCTCTTTCCATATCTACCCTGGCCCTCGTGCCAATCCTCCTCCAACCCCCTCCTCAGAACCCCTCTAGTGATACCGTCCGAAGTGACTCTCTCATATTCCTCCTCCTCAATGGTATTGCAGTTTTTACAGGTCTCTATCTCCTCCTCCTGGATTCATTGTCTTATAATACTTATAATGTATCAGTGGCTCGTATCCTTCTTGGCGGGGCTATACTTCTCCTAGTCCTCCCCTTGTCTCTACCTGGGATCATCTATTCTCACGGTTGGGCATGTCAAACCTCCCATTCAAGTTCCAACATGGGGGAGGTAGAATTCCTTGAGCTTCAGAAGGAACTCATTGGAAGTAGGGCCACAAACATGAATTTTAACTCTACAAGCACAGATGATGATCATCCTACAAGCACGGATGATGATCATCCTACAGGCACGGATGATGATCATCCTACAAGCACGGATGATGACTCAAATGATATTGCATACAGTGCACAAGAGAAGCAAGGGTGTTGTGAGGTTGTGACTAGGAAGGATCAGTTAGTGAGGCTAGGTGAGGAACACCCTGCTTGGATGTTGGTCCGCAGGTGGGATTTCTGGCTATATTACATAGCATACCTCTGTGGGGGAACGATTGGGCTAGCTTACAGTAATAACCTAGGGCAGATTTCAGAATCACTAGGATACAGTTCAGAGACTAATATGATTGTCACACTCTACTCAGCATGCTCATTCTTTGGACGTTTGCTTTCAGCTGCACCAGACTTTCTGAAAAACAAGGTGTACTTTGCGAGGACAGGGTGGCTTGCGGTAGCCCTTGTGCCGACACCTCTTGCCTTCTTTTGGCTTGCTCTGTCTGGCAGCAAGATAGCATTGCATGCAGGCACGGGCTTGATTGGGCTTAGCTCTGGGTTCGTATTTGCAGCAGCTGTGTCTATCACATCAGAACTATTTGGGCCTAACAGTACCGGGGTCAACCACAACATCCTCATCACAAACATCCCACTTGGCTCGCTCCTTTATGGCCTGCTGGCAGCTCTAGTGTATGATTCTAATATAGAAAGTTCAAAACAAAAGGTCTTGATTGGGGAAGCAATGGTGTGCATGGGAAGGCAATGCTACCAGCAGACTTTTTTTTGGTGGGGATGCATTTCCTTGTTGGGTTTAGCTTGTAGTTTCTCACTTTTTCTACGAACTAGACCTGCTTATGACCATTTTGAAAGAAATCGGAAACAGAGGGAATCAGAATTCTTTTAG 1770 0.4678 MVGESRRWMILVATTWIQAFTGTNLDFSSYSSHLKSVLGISQLQLNYLSVASDLGKAFGWCCGVSLFYLPLCLLLFMAAFMGLLGYGLQWLLIQRLISLPYVLVFLICLLAGCSISWFNTLCYVLCIQHFPSNRPLALSLTTGFNGVSAALYTLIANAINPHNDSLYLSLNALVPLSISTLALVPILLQPPPQNPSSDTVRSDSLIFLLLNGIAVFTGLYLLLLDSLSYNTYNVSVARILLGGAILLLVLPLSLPGIIYSHGWACQTSHSSSNMGEVEFLELQKELIGSRATNMNFNSTSTDDDHPTSTDDDHPTGTDDDHPTSTDDDSNDIAYSAQEKQGCCEVVTRKDQLVRLGEEHPAWMLVRRWDFWLYYIAYLCGGTIGLAYSNNLGQISESLGYSSETNMIVTLYSACSFFGRLLSAAPDFLKNKVYFARTGWLAVALVPTPLAFFWLALSGSKIALHAGTGLIGLSSGFVFAAAVSITSELFGPNSTGVNHNILITNIPLGSLLYGLLAALVYDSNIESSKQKVLIGEAMVCMGRQCYQQTFFWWGCISLLGLACSFSLFLRTRPAYDHFERNRKQRESEFF* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0063 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 577 - -
Vvi15g0063 589 Gene3D MFS general substrate transporter like domains 363 581 IPR036259 -
Vvi15g0063 589 SUPERFAMILY MFS general substrate transporter 212 572 IPR036259 -
Vvi15g0063 589 MobiDBLite consensus disorder prediction 304 327 - -
Vvi15g0063 589 Gene3D MFS general substrate transporter like domains 3 192 IPR036259 -
Vvi15g0063 589 Pfam Nodulin-like 7 255 IPR010658 -
Vvi15g0063 589 SUPERFAMILY MFS general substrate transporter 6 187 IPR036259 -
Vvi15g0063 589 MobiDBLite consensus disorder prediction 295 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0063 Vvi-Chr15 1786113 1789727 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0063 1 588 Nodulin-like Gene Family AT1G31470 51.864 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0063 - - vvi:100262611 1072.38