Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0021 ATGGCTGATCGCGCCGTTTCCCTCCTAGTTGCTCCTATTGTCGACATGGCCATAAAAAAGGCCCTTTCCTTGATCAACGAAGAGTTTCACGCGATCTATGGTGTTAAGAAAGACATAGAAAAGCTCCAAGGAACTTTACGCACAATCAAAAACGTGCTTAAAGATGCAGAGGAGAGGCAGCTGACGAATCTTTCCCTGAAAGATTGGCTAGAAAAGCTTGAAGATGCAGCTTATGACACAGAAGACGTATTGGATGCTTTTTCGACTGAAGTTCATTTGTGGAACAGAAATCAGGGTCAACCTCCTTCTAGTGTAAGTAAATTTTCCTTTCAAAGAGATATTGCTGGTAAAATCAGGAAGATCTTAACCAGACTAGATGAAATTGATCACAATAGTAAACAATTCCAACTTGTCCATAATGATAGTGTCCCGGAGACCCAAAACCGTGCCCCCCAAACTGGTTTTTTTGTGGATAGCACAACTGTTGTTGGTAGAGAAGATGACAAAAATAAGATGGTAGAATTGTTGCTATCAGGTGACTTGGATAAAGAAGGTGAGATTTCTGTCATTCCCATCATTGGTATGGGAGGTCTGGGCAAAACAACTCTTGCCCAACTCGTCTACAATGATGAGAGGGTAAAAGAATGTTTTGAGTTCAGAATGTGGGTATCGGTCAACGTTGATTTTGACCTCTCTAGGATTCTCAAAGACATCATAGAGTATCATACTGAGATGAAGTATGACCTCAATTTATCCCTAAGCCTGCTAGAATCCCGTTTCCTAGAGTTCCTGGCAGGAAAAAAATTCCTACTTGTTCTGGACAATGTCTGGAATGATGATTATATGAAATGGGAGCCACTTAAAAATATTTTAAAGCAAGGGGGAAGGGGAAGTAAAGTATTAATTACCAGTCGAACCTCCAAGGTTTCCGCTATTATGGGCACACAGGATCCTTACATGCTGGACAGTTTACCTGAGGAAAAATGTTGGTCATTGTTCCAGAAAATTGCATTTGAACAGTGTAACTTGTCCAGCGAAAGACGGGGGGAATTGGAAAGCATTGGTAAGAACATCATTCGCAAGTGCCAATTTTTGCCTCTGGCTGTGAAAGTAATGGCAGGTCTGTTGCGAGGCAATGATGATGTGGGAAAATGGCAGATGATCTTAAGAAATGATATATGGGATGCAGAGGGGGATAATCCTAGGATTATTCCTGCTCTGAAATTGAGTTATGACCAGCTTTCTTCTCATCTAAAGCAATGTTATGCTTTCTGTTCCATATTTCCCAAGGCATATATCTTTGATAAGAAAGAGCTGGTCAAATTCTGGGTGGCAGAAGGCTTCATTCAAGAAAGTGGACAGGAAACTGGAACTGAATGCTTTGATAAGCTGTTAATGAGATCCTTCTTTCAAGTTCTGAATGTTGACAACAAGGTGAGGTACAGGATGCATGACCTTATCCATGACTTGGCTAGACAAGTCTCCCGCCCTTACTGCTGCCAAGTGGAAGATGCTAATATTTCTGACCCGTTTAACTTTCGTCATGCATCGCTGCTGTGTAAAGATGTCGAGCAACCTCTCATCAAGCTCATCAATGCATCCAAAAGGCTGCGCACTCTTCTATTTCACAAAGAGAACTTGAAAGATTTGAAGCTGCAGGCCCTTGATAACATGTTCCATACAATGACATACATCCGTGTGTTGGATCTGAGTTCCTCCACAATTTTGGAACTGCCACAATCAATTGAGAAGTTGAAGCTCTTGCGCTATCTCGACCTCTCCAAAACTGAAATTCGAAGGCTTCCAGACTCGTTATGTAACCTCTACAATTTGCAGACACTGAAACTCTTAGGGTGTCTTTGGCTTTTCGAATTGCCCAGGGACCTCAGGAAGCTAATTAACCTGCAGCATCTTGAGCTGGATGATATGTTCTGGCACAAGATTACAAGGTTGCCACCAGGAATGGGAAAATTAACCAGTCTACAGAACTTGCACGCGTTTCATACCGGCTCAGAGAAGGGATTTGGGATTGAAGAACTGAAGGACATGGTGTATCTTGCAGGAACATTGCATATTTCAAAACTTGAAAATGCAGTTAATGCCAGGGAGGCGAAGTTGAACCAGAAAGAAAGCCTTGACAAGTTGGTGTTGGAATGGAGCAATAGAGATGCTGACCCGGAAGACCAAGCAGCTGAAGAGACGGTGCTGGAAGACCTCCAGCCTCACTCAAACGTCAAAGAGCTCCAGATTTGTCACTACAGAGGCACCAGATTACCAGTTTGGATGAGAGATGGACTGCTCCAAAAGCTTGTAACTGTTTCCTTGAAGCATTGCACAAAGTGCAAAGTCCTCTCACTTGGTCGGTTACCCCACCTTCGACAGCTTTGCATTAAAGGGATGCAAGAGTTGGAGGACTGGCCTGAGGTGGAATTCCCTTCTCTGGATACGCTAAAGATTAGTAACTGCCCCAAGCTCAGAAAGTTACACTCGTTCTTTCCTATCCTAAGAGTTTTGAATATCAAAAAGTGTGACTCCCTGAGGGCTCTTGCAGTAACCCCATCTCTGATGTTTCTAATACTAGTGAACAATCCAGTTCTGGAAGATTGGCAGGAGATTTCAGGCACTGTTTTAAACAGTCTCAATCAACCCATAGGCCAAATGCACTCCTACCAGCATCTCTTGGAATTGAAAATCATTTGCTGCCCCAAGCTGCCCGCATTGCCACGCACTTTTGCTCCACAGAAGCTGGAGATCAGCGGGTGTGAGTTATTGACAGCCCTCCCAGTCCCAGAGCTCTCCCAACGTCTTCAGCATTTAGAGCTGGATGCTTGTCAGGATGGAAAACTGGTGGAGGCAATACCTGCAACCAGTTCCCTCTACTCCTTGGTCATTTCCAATATCTCAAATATAACCTCTCTTCCAATATTGCCCCATCTTCCAGGTCTCAAGGCTTTGTACATTCGTAATTGCAAAGATCTTGTGTCCTTGTCCCAAAAAGCAGCACCGCTGCAAGATCTGACATTTCTCAAACTACTGTCCATCCAAAGCTGCCCCGAGCTTGTGAGTTTGCCTGCTGAAGGGCTCTCCATAACACTTGAATGTTTGATGATTGGTTCGTGCCTGAATCTTGAGTCTCTTGGTCCCGTGGATGTGTTGAAGAGACTCACCTCCCTCAAGGATCTTTACATCGAGGACTGCCCCAAACTCAAGTGCTTGCCTGAGAAAGGAGTCCCCACCTCTCTTGAGCATTTGGTTATTCAGGGATGTCCCCTACTGATGGAGCAATGCCGAAAGGAAGGCGGAGGAGGCCCAGATTGGCTGAAGGTTAAGGACATCCCTGACCTAGAGATTGATTCCATCGATGACACACTTGGCCTTCCACACGAATCCTCTAAACCAAGACCATCTTCATCAGCACGATGGTATCATCATTTGGCATGCTGTAAAGGACAAACTTCAAAAGGAAAGAAGGTGGTAGGGGACCCATCAACTTCGGAATAA 3501 0.4427 MADRAVSLLVAPIVDMAIKKALSLINEEFHAIYGVKKDIEKLQGTLRTIKNVLKDAEERQLTNLSLKDWLEKLEDAAYDTEDVLDAFSTEVHLWNRNQGQPPSSVSKFSFQRDIAGKIRKILTRLDEIDHNSKQFQLVHNDSVPETQNRAPQTGFFVDSTTVVGREDDKNKMVELLLSGDLDKEGEISVIPIIGMGGLGKTTLAQLVYNDERVKECFEFRMWVSVNVDFDLSRILKDIIEYHTEMKYDLNLSLSLLESRFLEFLAGKKFLLVLDNVWNDDYMKWEPLKNILKQGGRGSKVLITSRTSKVSAIMGTQDPYMLDSLPEEKCWSLFQKIAFEQCNLSSERRGELESIGKNIIRKCQFLPLAVKVMAGLLRGNDDVGKWQMILRNDIWDAEGDNPRIIPALKLSYDQLSSHLKQCYAFCSIFPKAYIFDKKELVKFWVAEGFIQESGQETGTECFDKLLMRSFFQVLNVDNKVRYRMHDLIHDLARQVSRPYCCQVEDANISDPFNFRHASLLCKDVEQPLIKLINASKRLRTLLFHKENLKDLKLQALDNMFHTMTYIRVLDLSSSTILELPQSIEKLKLLRYLDLSKTEIRRLPDSLCNLYNLQTLKLLGCLWLFELPRDLRKLINLQHLELDDMFWHKITRLPPGMGKLTSLQNLHAFHTGSEKGFGIEELKDMVYLAGTLHISKLENAVNAREAKLNQKESLDKLVLEWSNRDADPEDQAAEETVLEDLQPHSNVKELQICHYRGTRLPVWMRDGLLQKLVTVSLKHCTKCKVLSLGRLPHLRQLCIKGMQELEDWPEVEFPSLDTLKISNCPKLRKLHSFFPILRVLNIKKCDSLRALAVTPSLMFLILVNNPVLEDWQEISGTVLNSLNQPIGQMHSYQHLLELKIICCPKLPALPRTFAPQKLEISGCELLTALPVPELSQRLQHLELDACQDGKLVEAIPATSSLYSLVISNISNITSLPILPHLPGLKALYIRNCKDLVSLSQKAAPLQDLTFLKLLSIQSCPELVSLPAEGLSITLECLMIGSCLNLESLGPVDVLKRLTSLKDLYIEDCPKLKCLPEKGVPTSLEHLVIQGCPLLMEQCRKEGGGGPDWLKVKDIPDLEIDSIDDTLGLPHESSKPRPSSSARWYHHLACCKGQTSKGKKVVGDPSTSE* 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0021 1166 PANTHER DISEASE RESISTANCE PROTEIN RP 53 843 IPR044974 GO:0006952
Vvi15g0021 1166 Gene3D Ribonuclease Inhibitor 1027 1099 IPR032675 -
Vvi15g0021 1166 Coils Coil 692 712 - -
Vvi15g0021 1166 Gene3D Ribonuclease Inhibitor 895 1026 IPR032675 -
Vvi15g0021 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 425 IPR027417 -
Vvi15g0021 1166 Pfam NB-ARC domain 177 390 IPR002182 GO:0043531
Vvi15g0021 1166 SUPERFAMILY L domain-like 482 878 - -
Vvi15g0021 1166 Gene3D Ribonuclease Inhibitor 520 882 IPR032675 -
Vvi15g0021 1166 Coils Coil 39 59 - -
Vvi15g0021 1166 Gene3D - 14 128 - -
Vvi15g0021 1166 Gene3D - 405 494 IPR036388 -
Vvi15g0021 1166 PRINTS Disease resistance protein signature 189 204 - -
Vvi15g0021 1166 PRINTS Disease resistance protein signature 263 277 - -
Vvi15g0021 1166 PRINTS Disease resistance protein signature 362 376 - -
Vvi15g0021 1166 PRINTS Disease resistance protein signature 560 576 - -
Vvi15g0021 1166 Pfam Rx N-terminal domain 14 95 IPR041118 -
Vvi15g0021 1166 CDD RX-CC_like 13 128 IPR038005 -
Vvi15g0021 1166 SUPERFAMILY L domain-like 873 1095 - -
Vvi15g0021 1166 Gene3D - 146 318 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0021 Vvi-Chr15 581698 585735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0021 186 662 WRKY Transcription Factor Family AT5G45050 21.663 3.51e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0021 - - vvi:100245433 2298.47