Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0015 ATGGACGACCTTCCCATTTCTCCGACGGAGCCCCGGGGGAGTCCCTCTCCCGGCAAGGAGCAGCAAGCCGCCGGCGTCGGAATCCTCCTCCAGATCATGATGCTCGTCCTCTCCTTCGTCCTCGGCCACGTCCTTCGCCGCAAAAAATTCTATTACCTTCCTGAGGCCAGCGCTTCTCTCTTGATAGGTTTGATTGTGGGTGGACTTGCCAACATCTCCGACACAGAAACTAGCATCAGGGCATGGTTTAATTTCCACGAGGAGTTTTTCTTCCTCTTTCTGCTACCTCCAATCATATTATATCCTTACTTGGGTTGTTGCAATTTGTTACTGCTTTCTTTGTTTGATCTCCTATCTGGTTTCAGTCTATCTCCTAAACCCTTCTTTTCAAATTTTGGGGCAATTGTGACATTTGCCATTGTGGGAACATTTATAGCTTCAACTGTTACGGGTATTCTGGTTTACCTTGGTGGTCTGATTTACCTCATGTACAGACTTCCATTTCTTGAATGTATGATGTTTGGTGCTCTTATATCAGCAACCGATCCTGTCACTGTTTTGTCCATATTTCAGATGGCAATTTCCTTGTACAGGACGATTTCATTAATTAAAAGCCATGTGCCATCTGAACAAAACTTCTTTATGGTCATTGTCAAGTTTCTTGAGACTTTTGTTGGTTCAATGTCATCAGTGGAAACATGCTATCCACTCTTCCCCCCTCCTTTGTAG 729 0.4486 MDDLPISPTEPRGSPSPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKFYYLPEASASLLIGLIVGGLANISDTETSIRAWFNFHEEFFFLFLLPPIILYPYLGCCNLLLLSLFDLLSGFSLSPKPFFSNFGAIVTFAIVGTFIASTVTGILVYLGGLIYLMYRLPFLECMMFGALISATDPVTVLSIFQMAISLYRTISLIKSHVPSEQNFFMVIVKFLETFVGSMSSVETCYPLFPPPL* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0015 242 MobiDBLite consensus disorder prediction 1 21 - -
Vvi15g0015 242 PRINTS Na+/H+ exchanger signature 175 185 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vvi15g0015 242 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vvi15g0015 242 Pfam Sodium/hydrogen exchanger family 117 193 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi15g0015 242 Gene3D - 168 211 - -
Vvi15g0015 242 PANTHER SODIUM/HYDROGEN EXCHANGER 15 228 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0015 15 191 Antiporters AT5G27150 30.556 7.72e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0015 K14724 - vvi:100264300 344.354