Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0014 ATGTTGCTGGGGAGAACATCAAGCACATTGTACGTCCTCGAGAATGTCCAGAATGCATCTCTTAAAGTTCGTTCTCGCCAAGAGAATGTTGCAGGCGTGAAGGTCCCCCCAAGTTCGAATATTTCACAGAAGGTGACACCCAGAATGCCCTCACGGGATTGGCCAGAGGTGGCCAACAGGTCCAGCTATGTCAAAGCAATTGAGGTTCTTGTTGAGCTTGCTTCATTACAGACATCATTCTTGACGCTTGATGAAGCGATCAAGACCACAAATCGTAGAGTTAATGCCCTGGAGAATGTTGTGAAGCCAAGGTTGGAGAACACGATTAACTGCATAAAGGGAGAGTTGGATGAGCTGGAAAGAGAGGACTTTTCTTCAGGTTTATAA 387 0.4625 MLLGRTSSTLYVLENVQNASLKVRSRQENVAGVKVPPSSNISQKVTPRMPSRDWPEVANRSSYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTINCIKGELDELEREDFSSGL* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0014 128 Pfam ATP synthase subunit D 4 125 IPR002699 GO:0046961
Vvi15g0014 128 NCBIfam V-type ATP synthase subunit D 12 124 IPR002699 GO:0046961
Vvi15g0014 128 MobiDBLite consensus disorder prediction 32 54 - -
Vvi15g0014 128 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 11 124 IPR002699 GO:0046961
Vvi15g0014 128 MobiDBLite consensus disorder prediction 32 47 - -
Vvi15g0014 128 Coils Coil 102 122 - -
Vvi15g0014 128 Gene3D - 3 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0014 Vvi-Chr15 355866 356252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0014 12 124 Primary Pumps ATPases(2) AT3G58730 71.795 4.68e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0014 K02149 - rcu:8268682 152.525