Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1920 ATGGTTTCAGAACTGCAAGAGGTTACTGGTCAACTATACCGGCCATCCCTGGAAGTTGCTAGGAGTTGCTGCAGACAAATCAAGAAAGGATATCAGAGAACGAACAGCCCTCGTTACTATCTCTCCTTTGGCAACAATGATCAACAAGGGACGAAATCAGAGCAAGGTGAACGCTGTGTTGTAGTTCAAATGGACACAGAGAGCCCCGTACTCTACCAGAAGGCCTGCCTGGATTACAATTTTGACAAACCACTAAAAGTCACTGGAGATGTGCACATAATCTTCTACCAAAAGTCGATGGGAGGCCGTCTGTTCTATACGTGCTTCAACACTGCTTTCATTAGGAACAGCTTGCTGCAGTTCACTGTAAGTAATTTGGATAAAATGGGGCACAAGGGGAAATCGATATGTGGTCCTGCCTTTGGTTTGGAGTTGCTGTTTGGGCCTGCTAATGCAGAGCACTCATTTCAGCCTACATTGGATGATGATGATTTGCTTTAA 501 0.4511 MVSELQEVTGQLYRPSLEVARSCCRQIKKGYQRTNSPRYYLSFGNNDQQGTKSEQGERCVVVQMDTESPVLYQKACLDYNFDKPLKVTGDVHIIFYQKSMGGRLFYTCFNTAFIRNSLLQFTVSNLDKMGHKGKSICGPAFGLELLFGPANAEHSFQPTLDDDDLL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1920 166 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 19 155 - -
Vvi14g1920 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 74 149 IPR035892 -
Vvi14g1920 166 Gene3D - 16 152 - -
Vvi14g1920 166 SMART PTEN_C2_2 13 149 IPR014020 -
Vvi14g1920 166 Pfam C2 domain of PTEN tumour-suppressor protein 63 147 IPR014020 -
Vvi14g1920 166 ProSiteProfiles C2 tensin-type domain profile. 1 150 IPR014020 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1920 1 165 Protein tyrosine phosphatase (PTP) family AT5G39400 58.084 9.47e-63 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1920 K01110 - vvi:100254134 345.125