Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1897 ATGGCGGCCAGAGTGATCCGCGTGGCGCAGGACGGCACTGGAGATTACCGGACTGTGCAGGAAGCCATAGACGTTGTGCCTCTCTGCAACAAATGCCGGATTGTGATTCGCGTGTCGCCGGGTGTGTACAAGCAGCCAGTCTACGTTCCCAAGACGAAGAACCTCATTACACTTGCTGGGTTGCGCCCTGAGGACACTGTACTCACCTGGAACAACACCGCCACCAAAATCGATCATCACCAGGCGGCTCGGGTGATTGGGACTGGAACTTTTGGGTGTGGGACTGCTATCGTTGAAGGGGAGGATTTTATTGCCGAGAATATCACTTTTGAGAACTCTTCTCCTGAGGGTTCAGGACAAGCTGTGGCAATTAGAGTAACGGCTGATCGTTGTGCCTTCTACAATTGCAGGTTTCTTGGGTGGCAGGATACTTTGTATTTGCATTACGGAAAACAATATCTGAAAGATTGCTATATTGAAGGAAGTGTGGATTTCATCTTTGGGAATAGCACTGCTCTGTTGGAGCATTGTCATATTCACTGCAAGTCAGCGGGATTCATAACAGCACAAAGTAGGAAATCTTCTCAGGAATCAACTGGCTATGTATTCCTCAGATGTGTGATCACTGGCAATGGTGGGGCTTCGTATACACATCTTGGACGACCGTGGGGACCCTTTGGAAGGGTGGTCTTTTTATACACATGGATGGATGCTTGCATCAAACATGTAGGTTGGCATAACTGGGGCAAAGCCGAGAATGAGAGAAGTGCTTGCTTTTACGAGTACAGGTGTTTTGGACCAGGCAGTTGCCCATCAAAACGTGTAACATGGGCTAGAGAACTGGTAGATGAAGAAGCAGAACAGTTCCTCATGCATTCTTTTATTGACCCGGATGTGGAGAGGCCTTGGCTGGCCCAGAGAATGGCTCTGAGGATACCATATTCCGCATAG 951 0.489 MAARVIRVAQDGTGDYRTVQEAIDVVPLCNKCRIVIRVSPGVYKQPVYVPKTKNLITLAGLRPEDTVLTWNNTATKIDHHQAARVIGTGTFGCGTAIVEGEDFIAENITFENSSPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQESTGYVFLRCVITGNGGASYTHLGRPWGPFGRVVFLYTWMDACIKHVGWHNWGKAENERSACFYEYRCFGPGSCPSKRVTWARELVDEEAEQFLMHSFIDPDVERPWLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1897 316 FunFam Pectinesterase 2 309 - -
Vvi14g1897 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Vvi14g1897 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Vvi14g1897 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 298 - -
Vvi14g1897 316 Gene3D - 1 310 IPR012334 -
Vvi14g1897 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1897 Vvi-Chr14 29786202 29789677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1897 4 309 Carbohydrate Esterase AT5G47500 37.143 4.46e-68 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1897 K01051 - vvi:100247362 669.848