Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1869 ATGGCGATAAAGCTCGGGTTATTTGCAATTTTTATGCTTTCCTTGTCATTTTTCTCTTCCACCCTATCGGCTTCTGACTCCGGCGACGTCAACTGGTGGTGCGACAAAACGCCATATCCGGCACCATGCAAGTACTTCATGAGCCATGGTGGGCACAAGTACAATGCGCCCAAGCAGAAGTCCGAGTTCCGAAAGATGGCTATGGAGGTGGCCATGGAGCGAGCCCTCACCGCGCAGAGCCACAACAAGTGGCTGGGGTCCAAGTGCCGCAACGAGCGCGAGAAGGCTGCATGGGCTGATTGCTTGAAGCAGTATCAAGACACCATTCAACAACTCAACCAAACCCTGGACCCTGCAACCAAGTGCACAGACTTTGACCAGCAAACTTGGCTCAGCACAGCCTTGATTTTTAGAAAATAA 420 0.5167 MAIKLGLFAIFMLSLSFFSSTLSASDSGDVNWWCDKTPYPAPCKYFMSHGGHKYNAPKQKSEFRKMAMEVAMERALTAQSHNKWLGSKCRNEREKAAWADCLKQYQDTIQQLNQTLDPATKCTDFDQQTWLSTALIFRK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1869 139 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 138 IPR035513 -
Vvi14g1869 139 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 135 IPR035513 -
Vvi14g1869 139 Pfam Plant invertase/pectin methylesterase inhibitor 30 135 IPR006501 GO:0004857
Vvi14g1869 139 NCBIfam pectinesterase inhibitor domain 8 135 IPR006501 GO:0004857
Vvi14g1869 139 CDD PMEI-like_3 32 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1869 Vvi-Chr14 29559691 29560110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1869 11 135 Carbohydrate Esterase AT2G45220 46.825 7.15e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1869 K01051 - vvi:100262077 249.98