Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1852 ATGGAGGCTGAACAGCGTGATGGGTTCACTCTCACCAAAGTGGAGGACATTGAGTCCAACGGTGGAAAGCAAGATGTGGGCTCTACCTCTTTCTTCAAGACCTGTTTCAATGGACTCAATGCTTTATCAGGAGTTGGGATCCTTTCCATCCCATATGCCCTTTCATCGGGAGGGTGGTTGAGCTTGGTTCTTCTACTTGTTATCGCCACTGCAACTTTCTACACAGGCTTGCTACTCAGAAGATGTATGGATGCCCATCCGAATATCCGAACTTACCCTGATGTTGGCGAGCGAGCATTTGGGAAGAAGGGAAGATTACTGGTATCTGTTTTCATGTATACCGAGCTCTACTTGGTTGCAACAGGCTTTCTAATCCTCGAAGGGGATAATCTACATAATCTGTTTCCCAACATGGGGCTTGAGATTTGGGGATTAATGATTGATGGGAGACAAAGCTTCATAATCATTGTGGGCCTTGTTATTTTGCCTTCTGTCTGGGTGAACAACCTCAGTATTCTTTCTTATATATCAGCCAGCGGTGTTTTAGCTTGTATCATCATTCTTGGCTCAATTCTATGGACCGGGGCCTTTGATGGAGTTGGATTTGATGAGAAGGGAACAAGTCTAAATTGGCAAGGAATCCCCACTGCTGTTAGCTTATATGCCTTCTGTTATTGTGCCCATCCGGTCTTCCCCACCTTGTACACTTCTATGAGGAAGAAGCATCAATTTTCTAATGTCCTCCTTGTATGCTTCATCTTCTGCACCATCACTTATGCAGCAATGGCAATTTTAGGGTACCTGATGTTTGGTTCAAATGTTCAATCACAAATAACCTTGAACCTTCCAATTGAGAAGCTTAGCTCAAGGATCGCCATATATACTACTCTGGTCAATCCCATATCCAAATATGCATTGATGGTTACACCAATTGTGAATGCTACTGAAAATTGGCTCCCATACTACTACAAGAAAAGACCATTTAGCCTTATAATAAGAAGCACCTTGGTATTCAGCACCATCATTGTAGCTCTGACAGTGCCATTTTTTGGGTCTCTCATGTCACTGGTGGGAGCTTTATTAAGTGTCCCAGCTTCAATCTTGTTGCCATGCTTATGCTATTTGAAGATTTCAGGCATTTACCACAAATTTGGAGTCGAACTAGTGATTATAATTGGGGTTGTGTTAATGGGTATTTCAGCTGGCATCATGGGTACCTACACATCTATAGTAGAAATAATAGGCCAGTTATGA 1254 0.4266 MEAEQRDGFTLTKVEDIESNGGKQDVGSTSFFKTCFNGLNALSGVGILSIPYALSSGGWLSLVLLLVIATATFYTGLLLRRCMDAHPNIRTYPDVGERAFGKKGRLLVSVFMYTELYLVATGFLILEGDNLHNLFPNMGLEIWGLMIDGRQSFIIIVGLVILPSVWVNNLSILSYISASGVLACIIILGSILWTGAFDGVGFDEKGTSLNWQGIPTAVSLYAFCYCAHPVFPTLYTSMRKKHQFSNVLLVCFIFCTITYAAMAILGYLMFGSNVQSQITLNLPIEKLSSRIAIYTTLVNPISKYALMVTPIVNATENWLPYYYKKRPFSLIIRSTLVFSTIIVALTVPFFGSLMSLVGALLSVPASILLPCLCYLKISGIYHKFGVELVIIIGVVLMGISAGIMGTYTSIVEIIGQL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1852 417 Pfam Transmembrane amino acid transporter protein 28 410 IPR013057 -
Vvi14g1852 417 PANTHER OS05G0424000 PROTEIN-RELATED 37 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1852 Vvi-Chr14 29390984 29392813 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1852 14 417 Amino Acid or Auxin Permease AAAP Family AT3G28960 61.235 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1852 K15015 - vvi:100854125 798.119