Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1847 ATGGAGGCTGAACAGCGTGATGGGTTCACTCTCACCTTGCCCCTCTTGCATGATGATCAGAATCACAACAAAGTGGAGGACATTGAGTCCAACGGTAGAAAGCAAGATGTGGGCTCTACCTCTTTCTTCAAGACCTGTTTCAATGGACTCAATGCTTTATCAGGAGTTGGGATCCTTTCCACACCATATGCCCTTTCATCGGGAGGGTGGTTGAGCTTGGTTCTTCTACTTGTTATCGCCACTGCAACTTTCTACACAGGCTTACTACTCAGAAGATGTATGGATGCCCATCCAAATATCCGAACTTACCCTGATGTTGGCGAGCGAGCATTTGGGAAGATGGGAAGATTACTGGTATCTGTTTTCATGTATACCGAGCTCTACTTGGTTGCAACAGGCTTTCTAATCCTCGAAGGGGATAATCTACATAATCTGTTTCCCAACATGGGGCTTGAGATTTGGGGATTAATGATTGATGGGAGACAAAGCTTCATAATCATTGTGGGCCTTGTTATTTTGCCTTCTGTCTGGGTGAACAACCTCAATATTCTTTCTTATATATCAGCCAGCGGTGTTTTAGCTTGTATCATCATTCTTGGCTCAATTCTATGGACCGGGGCCTTTGATGGAGTTGGATTTGATGAGAAGGGAACAAGTCTAAATTGGCAGGGAATCCCCACTGCTGTTAGCTTATATGCCTTCTGTTATTGTGCCCATCCGGTCTTCCCCACCTTGTACACTTCCATGAGGAAGAAGCATCAATTTTCTAATGTCCTCCTTGTATGCTTCATCTTCTGCACCATCACTTATGCAGCAATGGCAATTTTAGGGTACCTGATGTTTGGTTCAAATGTTCAATCACAAATAACCTTGAACCTTCCAATTGAGAAGCTTAGCTCAAGGATCGCCATATACACTACTCTGGTCAATCCCATATCCAAATATGCATTGATGGTTACACCAATTGTGGATGCTACTGAAAATTGGCTCCCATACTACTACAAGAAAAGACCATTTAGCCTTATAATCAGATCCACCTTGGTATTCAGCACCATCATTGTAGCTCTGACAGTGCCATTTTTTGGGTCTCTCATGTCACTGGTGGGAGCTTTTTTAAGTGTCACAGCTTCAATCTTGTTGCCATGCTTATGCTATTTGAAGATTTCAGGCATTTACCACAAATTTGGAGTCGAACTAGTGATTATAATTGGGGTTGTTTTAATGGGTATTTCAGCTGGCATCATGGGTACCTACACATCTATAGTAGAAATAATAGGCCAGTTATGA 1287 0.4266 MEAEQRDGFTLTLPLLHDDQNHNKVEDIESNGRKQDVGSTSFFKTCFNGLNALSGVGILSTPYALSSGGWLSLVLLLVIATATFYTGLLLRRCMDAHPNIRTYPDVGERAFGKMGRLLVSVFMYTELYLVATGFLILEGDNLHNLFPNMGLEIWGLMIDGRQSFIIIVGLVILPSVWVNNLNILSYISASGVLACIIILGSILWTGAFDGVGFDEKGTSLNWQGIPTAVSLYAFCYCAHPVFPTLYTSMRKKHQFSNVLLVCFIFCTITYAAMAILGYLMFGSNVQSQITLNLPIEKLSSRIAIYTTLVNPISKYALMVTPIVDATENWLPYYYKKRPFSLIIRSTLVFSTIIVALTVPFFGSLMSLVGAFLSVTASILLPCLCYLKISGIYHKFGVELVIIIGVVLMGISAGIMGTYTSIVEIIGQL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1847 428 PANTHER OS05G0424000 PROTEIN-RELATED 48 408 - -
Vvi14g1847 428 Pfam Transmembrane amino acid transporter protein 39 421 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1847 Vvi-Chr14 29357875 29359748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1847 25 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 60.741 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1847 K15015 - vvi:100255991 823.542