Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1846 ATGGCGCCGGAGCAGCTTGATGGGTTTTCTCTCGCCTTCCCCCTTCTTCATGATGAGAGTCAAAACGTAGAGGACATGGAGTACTACTCCACTGGCTGCAAGCTAGACTTGGGCTCTACCTCTTTCTTCAAGACCTGTTTTAATGGCCTCAATGCTTTATCAGGGATTGGGATCCTTTCGGTTCCATATGCACTTGCATCAGGAGGGTGGTTGAGCTTGATGCTTCTGTTTGTTATCGCCCTTGCAACTTTCTATACAGGTTTGCTACTTCAAAGATGTATGGATGTTGATCTAAATATCCGAACTTACCCAGATATAGGTGAGCAAGCATTTGGGAAGAAAGGAAGATTAATGGTATCAATCTTCATGTATTTGGAGCTTTACTTGGTTGCAACTGGTTTTCTAATTCTAGAAGGGGATAATCTGCATAATTTATTCCCCATGGTGGGATTTGAAATTTTTGGGCAAGTAATTGATGGTAGACAAAGCTTCATACTGATTTCTGGCCTTGTGATTCTGCCATCGGTCTGTTTCTACAATTTAAACATGCTTTCTTATATCTCAGCAAGCGGTGTTTTTGCTTGTATAATCATCCTTGGCTCAATTTTATGGACTGGAGTATTTGATGGAGTTGGATTTCATGGGAAAGGGACAACTCTGAATTGGAAAGGAATCCCTACTGCCTTTAGTTTATACGCTTTCTGCTATTGTGCCCATCCAGTCTTTCCTACTTTATACACTTCTATGAGAAAGAAAAACCAGTTTTCTACTGTCTTGCTTGTAGGCTTTGTCTTCTGCACCATTACTTATGCAGCAATGGCAGTTTTGGGGTACTTAATGTTTGGTTCAGAGGTGCAATCACAAATAACTTTAAACCTTCCAATTGAGAAACTTAGCTCAAGAGTGGCCATATACACTACTCTAGTCAATCCCATATCCAAATATGCATTGATAGTTGTACCAATTGTGAATGCTACAGAAAACTGGTTTCCATACTGCTGCAATAGAAGATTATTTAGCCTTCTAATAAGAACCGCTTTGGTGTTCAGTACTATCATTGTAGCTCTGACAGTCCCATTTTTTGGGTCTCTCATGTCCCTGGTGGGAGCATTTTTGAGTGTCACGGGTTCAATCTTGTTGCCGTGCTTATGCTACTTGAAGATTTCAGGCATTTACCACAAATTTGGAATTGAACTGGTGATTATAATTGGGGTTATGTTGATGGGTATTTCAGCTGGTATCGTGGGTACCTACACATCCATAGTGGAAATAATAGGACAGTTGTGA 1287 0.4064 MAPEQLDGFSLAFPLLHDESQNVEDMEYYSTGCKLDLGSTSFFKTCFNGLNALSGIGILSVPYALASGGWLSLMLLFVIALATFYTGLLLQRCMDVDLNIRTYPDIGEQAFGKKGRLMVSIFMYLELYLVATGFLILEGDNLHNLFPMVGFEIFGQVIDGRQSFILISGLVILPSVCFYNLNMLSYISASGVFACIIILGSILWTGVFDGVGFHGKGTTLNWKGIPTAFSLYAFCYCAHPVFPTLYTSMRKKNQFSTVLLVGFVFCTITYAAMAVLGYLMFGSEVQSQITLNLPIEKLSSRVAIYTTLVNPISKYALIVVPIVNATENWFPYCCNRRLFSLLIRTALVFSTIIVALTVPFFGSLMSLVGAFLSVTGSILLPCLCYLKISGIYHKFGIELVIIIGVMLMGISAGIVGTYTSIVEIIGQL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1846 428 PANTHER OS05G0424000 PROTEIN-RELATED 48 407 - -
Vvi14g1846 428 Pfam Transmembrane amino acid transporter protein 39 418 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1846 Vvi-Chr14 29344663 29346160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1846 16 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.971 1.71e-174 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1846 K15015 - vvi:100261080 852.432