Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1819 ATGATTATTGTTATTTCTTTGTCCACCATCCTGTTTCTATCATTTGCAGTCTTTGGGTGTCTGTTTCTCTCAGCCCAGAAGAAGAGAAGAGATAAAAAAATTCTACCAACAGAAGCAGCAGCTCCAAGGCATGGGGATCTATTCTCAATATGGGGCTTCGATGGAAGGCTTGTTTATGAAGATATAATCAAGGCAACAAAGGATTTTGATATTAAATATTGCATAGGTGCTGGAGGTTCTAGCAGAGTCTACAAGGCACAACTGCCTGATGGAAATGTGGTTGCCTTGAAGAAACTTCACCATCTGGAGATTGAGGAGCCAGCTTATATAAAAAGCTTCAAAACTGAGGTACAAATATTATCAGCGATAAGGCATCGCGATATTGTGAAACTTCATGGCTTCTGTCAGCATAAAAAAGCTATGTTTCTAATTTATGACTACAAAGAAAGAGGGAACTTGTGCAACATGCTGAGAAATGAAGTTGGAGCTGTGGAATTAGATTGGATTAAGAGAGTGAACGTTGTCAAAAGCATCGCTCACGCCTTATCCTATATGCATCATGATTGTAACACACCAATAATTCATCGCGACATCTCCAGCAACAATATCCTTTTAGATTCAGAGTTAAAGGCTTTTGTATCTGATTTTGGTACCGCTAAACTTATATATCCAAATTCATCGAATCAAACCCTTCTTGCAGGCACATACGGCTATATTGCACCAGAGCTTGCCTACACGTTGGTCGTGACAGAAAAATGTGATGTTTATAGTTTTGGGGTGGTGGCACTTGAGACAATGATGGGAAAGCATCCAAAAGAGCTTATCACCTTACCACCCTCATCAGCACAAAGTATAATGCTTGGGGATATATTAGACGCACGCCTCTCACCTCCTGCAGATCTGCGAGTTCTTAAAGATGTAATTCCTGTAGTAAGGATGGCGCTCAAATGCATAGATTCCAATCTTCAATCCCGCCCAACAATGCAGCATGTGTCCGGAGCGCTTCTTGCTCATTCACCATTCCCCAAGGTGCCCTTTCATGAGATTTCCCTCTGGCATCTAATGAATCAAGATGTATAA 1080 0.4111 MIIVISLSTILFLSFAVFGCLFLSAQKKRRDKKILPTEAAAPRHGDLFSIWGFDGRLVYEDIIKATKDFDIKYCIGAGGSSRVYKAQLPDGNVVALKKLHHLEIEEPAYIKSFKTEVQILSAIRHRDIVKLHGFCQHKKAMFLIYDYKERGNLCNMLRNEVGAVELDWIKRVNVVKSIAHALSYMHHDCNTPIIHRDISSNNILLDSELKAFVSDFGTAKLIYPNSSNQTLLAGTYGYIAPELAYTLVVTEKCDVYSFGVVALETMMGKHPKELITLPPSSAQSIMLGDILDARLSPPADLRVLKDVIPVVRMALKCIDSNLQSRPTMQHVSGALLAHSPFPKVPFHEISLWHLMNQDV* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1819 359 Gene3D Transferase(Phosphotransferase) domain 1 149 340 - -
Vvi14g1819 359 PANTHER LEUCINE RICH REPEAT KINASE 2 9 339 - -
Vvi14g1819 359 ProSiteProfiles Protein kinase domain profile. 69 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1819 359 Gene3D Phosphorylase Kinase; domain 1 45 147 - -
Vvi14g1819 359 Pfam Protein kinase domain 73 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1819 359 FunFam Os01g0296000 protein 52 147 - -
Vvi14g1819 359 ProSitePatterns Tyrosine protein kinases specific active-site signature. 193 205 IPR008266 GO:0004672|GO:0006468
Vvi14g1819 359 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Vvi14g1819 359 SUPERFAMILY Protein kinase-like (PK-like) 51 333 IPR011009 -
Vvi14g1819 359 FunFam MDIS1-interacting receptor like kinase 2 148 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1819 Vvi-Chr14 29134936 29136130 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1819 1 241 Receptor kinase-like Gene Family AT4G08850 47.131 6.08e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi14g1819 Pkinase 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1819 - - vvi:104881696 720.694