Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1816 ATGGCGTCCTCCATTATAATTTCTCCAGCAGTGGTTGTAGTTACCATTACCAGTATCATGATGATAATGTTATTCTCTCTTGCCAATGCATTATCATCACCATCTTCATCAACTGATGAGGCAGAGGCTCTGCGCAGCACCGGTTGGTGGAATTCTACCTCTGCTCATTGCAACTGGGATGGTGTATATTGCAATAATGCCGGAAGAGTTACTCAAATCGCCTTTTTCGATTCAGGAAAAAAATTGGGTGAGCTTAGCAAATTGGAGTTTTCTTCATTTCCCAGCCTGGTTGAGCTCTTCCTTTCTGACTGTGGACTCAATGGCAGCATCCCACACCAAATAGGTACTCTTACTCAACTCATCATCCTATATCTCCCTTTAAACAATCTTACAGGTGAGCTACCTCTTTCCTTGGCTAACCTCACTCAGTTGGAGTACCTCTCCCTTCATTCTAATCGACTACATGGTTCGATTCCTCCTGAAATTGGGAAAATGAAGAATCTGATTTATTTTATTCTCCATGATAACAACCTTACTGGTGTCATCCCTTCATCTTTTGGTAATCTTACCAATCTGACTTATCTTTATCTTGGCAGTAATCAAATAAGTGGTTTTATCCCTCCTCAAATTGGGAAAATGAAGAACCTGGAGTTCCTCTCTCTTTCTTATAACGGACTACATGGTTCAATTCCTCCTGAAATTGGGAAATTGCAGAATCTGAATTATTTGTTTCTAGACTATAACAACCTTACTAGTGTCATCCCTTCATCTTTTGGTAATCTTACCAATCTGACTTATCTTTATCTTGATAGTAATCAAATAAGTGGTTTTATCCCTCCTCAAATTGGGAAAATTAAGAACCTGGAGTTGCTTGAACTTTCTTATAACGGACTACATGGTCCAATTCCTCTTGAAATTGGGAAATTGAAGAATCTGAAAATTTTGAATTTGGGTTATAACAACCTTATTGGTGTCATCCCTTCATCTTTTGGTAATCTTACCAATCTAACTTATCTTACTCTTGGAGGTAATCAAATCAGTGGTTTTATCCCTCCTGAAATTGGGAAAATGAAGAATCTGATTTTTTTTAATCTGGGTTATAACAGCCTTACTGGTGTCATCCCTTCATCTTTTGGTAATCTTACCCATCTAACTTCTCTTATTCTTAGAGGAAATCAAATCAATGGTTCCATCCCTCCTGAAATTGGGTATCTTTTGGATTTATTATATCTAGATCTCAATACGAATCAAATAAGTGGTTTCATCCCTGAAGAAATACTGAATTTGAAGAAATTGGGTCATCTAGACATCAGTAATAACTTAATAAGTGGAAAGATACCTTCAGAGTTGGGAAATTTGAAAGAAGCAATATACTTCAATCTCTCCCGCAATAACATCTCTGGCACCATTCCTCTTTCTATTTCTAACAACATGTGGACGTTATTTGATTTATCACACAATCAGTTGGAGGGTCAATCTACAGCTCCACTAGAGGCATTTGACCACAACAAAGGTTTATGTGATGGAATCAAAGGTTTGTCGCATTGCAAGAAAAGACACCAAATCATTCTCATCATTGCTATTTCTTTATCTGCAACCTTGTTGCTTTCAGTTGCAGTCCTTGGGTTTCTCTTCCGCAAACAAAAGATAAGAAAAAATCAATTACCCAAGACAACAAAGGTAAAAAACGGAGATCTATTTTCCATATGGGATTATGATGGTGTGATTGCTTATCAAGACATCATCCAAGCAACCGAGGATTTTGACATCAAATACTGCATAGGCACGGGAGGCTATGGGAGCGTTTACAGAGCACAACTGCCTTCCGGGAAGGTGGTTGCCTTGAAAAAACTTCATGGATGGGAAAGAGATGATCCAACTTACTTGAAAAGCTTTGAAAATGAAGTTCAAATGCTATCAAGAATACAACACCGTAACATTGTGAAACTTCATGGCTTCTGTCTACATAACAAATGCATGTTTCTAGTTTACAAATATATGGAAAAAGGAAGCTTGTATTGTATGCTAAGGGATGAAGTTGAGGTTGTGCAATTGGATTGGATAAAGAGGGTGAATGTTGTTAAAGGCATTGCTAATGCGTTATCTTACATGCATCATGACTCTACCTTGCCTATCATTCATCGAGACATATCAAGTAACAACATTCTTCTAGATTCCAAGCTTGAAGCATTCGTAGCAGATTTTGGCACTGCAAGATTGTTAGATCCTGATTCATCCAATCAAACCCTTCTTGCAGGCACATACGGATATATTGCACCAGAGCTTGCCTATACTATGGTTGTGACTGAAAAATGCGACGTTTATAGCTTTGGGATGGTAGCATTGGAAACAATAATGGGAAAGCATCCAGGAGATCTTGTCACCTCATTATCAGCTTCATCAACTCAAAACATAACATTAAAGGATGTATTAGACTCCCGTCTTTCATCTCCTAAAGGTCCACAAGTTGCTAATGACGTAGCTCTTGTAGTATCATTGGCGCTCAAATGTCTCCATTGTAATCCACGATTTCGTCCATCTATGCAACAAGTGTCTTGGAGACTTAGCGCTAGCAAGTCATTTCCACAACCCGTTGGTGCAATATCACTTTTGCAATTGAAAAATGAAGAAATTTAA 2637 0.3819 MASSIIISPAVVVVTITSIMMIMLFSLANALSSPSSSTDEAEALRSTGWWNSTSAHCNWDGVYCNNAGRVTQIAFFDSGKKLGELSKLEFSSFPSLVELFLSDCGLNGSIPHQIGTLTQLIILYLPLNNLTGELPLSLANLTQLEYLSLHSNRLHGSIPPEIGKMKNLIYFILHDNNLTGVIPSSFGNLTNLTYLYLGSNQISGFIPPQIGKMKNLEFLSLSYNGLHGSIPPEIGKLQNLNYLFLDYNNLTSVIPSSFGNLTNLTYLYLDSNQISGFIPPQIGKIKNLELLELSYNGLHGPIPLEIGKLKNLKILNLGYNNLIGVIPSSFGNLTNLTYLTLGGNQISGFIPPEIGKMKNLIFFNLGYNSLTGVIPSSFGNLTHLTSLILRGNQINGSIPPEIGYLLDLLYLDLNTNQISGFIPEEILNLKKLGHLDISNNLISGKIPSELGNLKEAIYFNLSRNNISGTIPLSISNNMWTLFDLSHNQLEGQSTAPLEAFDHNKGLCDGIKGLSHCKKRHQIILIIAISLSATLLLSVAVLGFLFRKQKIRKNQLPKTTKVKNGDLFSIWDYDGVIAYQDIIQATEDFDIKYCIGTGGYGSVYRAQLPSGKVVALKKLHGWERDDPTYLKSFENEVQMLSRIQHRNIVKLHGFCLHNKCMFLVYKYMEKGSLYCMLRDEVEVVQLDWIKRVNVVKGIANALSYMHHDSTLPIIHRDISSNNILLDSKLEAFVADFGTARLLDPDSSNQTLLAGTYGYIAPELAYTMVVTEKCDVYSFGMVALETIMGKHPGDLVTSLSASSTQNITLKDVLDSRLSSPKGPQVANDVALVVSLALKCLHCNPRFRPSMQQVSWRLSASKSFPQPVGAISLLQLKNEEI* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1816 878 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 400 516 - -
Vvi14g1816 878 Gene3D Phosphorylase Kinase; domain 1 548 666 - -
Vvi14g1816 878 SUPERFAMILY L domain-like 275 491 - -
Vvi14g1816 878 Gene3D Ribonuclease Inhibitor 281 403 IPR032675 -
Vvi14g1816 878 FunFam Leucine-rich repeat receptor protein kinase EMS1 206 294 - -
Vvi14g1816 878 SUPERFAMILY Protein kinase-like (PK-like) 567 855 IPR011009 -
Vvi14g1816 878 FunFam MDIS1-interacting receptor like kinase 2 667 861 - -
Vvi14g1816 878 Pfam Protein kinase domain 592 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1816 878 SUPERFAMILY L domain-like 49 345 - -
Vvi14g1816 878 ProSitePatterns Protein kinases ATP-binding region signature. 594 616 IPR017441 GO:0005524
Vvi14g1816 878 Pfam Leucine rich repeat 355 394 IPR001611 GO:0005515
Vvi14g1816 878 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
Vvi14g1816 878 Pfam Leucine rich repeat 308 346 IPR001611 GO:0005515
Vvi14g1816 878 Pfam Leucine rich repeat 239 298 IPR001611 GO:0005515
Vvi14g1816 878 Gene3D Ribonuclease Inhibitor 404 504 IPR032675 -
Vvi14g1816 878 Gene3D Ribonuclease Inhibitor 178 280 IPR032675 -
Vvi14g1816 878 ProSiteProfiles Protein kinase domain profile. 588 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1816 878 Gene3D Ribonuclease Inhibitor 22 177 IPR032675 -
Vvi14g1816 878 FunFam Uncharacterized protein 32 178 - -
Vvi14g1816 878 SMART LRR_typ_2 141 164 IPR003591 -
Vvi14g1816 878 SMART LRR_typ_2 261 285 IPR003591 -
Vvi14g1816 878 SMART LRR_typ_2 237 260 IPR003591 -
Vvi14g1816 878 SMART LRR_typ_2 189 213 IPR003591 -
Vvi14g1816 878 SMART LRR_typ_2 165 188 IPR003591 -
Vvi14g1816 878 SMART LRR_typ_2 93 117 IPR003591 -
Vvi14g1816 878 SMART LRR_typ_2 429 453 IPR003591 -
Vvi14g1816 878 SMART LRR_typ_2 333 356 IPR003591 -
Vvi14g1816 878 SMART LRR_typ_2 309 332 IPR003591 -
Vvi14g1816 878 SMART LRR_typ_2 381 405 IPR003591 -
Vvi14g1816 878 SMART LRR_typ_2 357 380 IPR003591 -
Vvi14g1816 878 ProSitePatterns Tyrosine protein kinases specific active-site signature. 712 724 IPR008266 GO:0004672|GO:0006468
Vvi14g1816 878 FunFam Leucine-rich receptor-like protein kinase family protein 302 399 - -
Vvi14g1816 878 Gene3D Transferase(Phosphotransferase) domain 1 667 863 - -
Vvi14g1816 878 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 271 857 - -
Vvi14g1816 878 FunFam Leucine-rich repeat receptor protein kinase MSP1 551 666 - -
Vvi14g1816 878 SMART LRR_sd22_2 189 218 - -
Vvi14g1816 878 SMART LRR_sd22_2 141 156 - -
Vvi14g1816 878 SMART LRR_sd22_2 381 396 - -
Vvi14g1816 878 SMART LRR_sd22_2 261 290 - -
Vvi14g1816 878 SMART LRR_sd22_2 429 455 - -
Vvi14g1816 878 SMART LRR_sd22_2 309 335 - -
Vvi14g1816 878 SMART LRR_sd22_2 237 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1816 Vvi-Chr14 29123589 29126449 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1816 69 760 Receptor kinase-like Gene Family AT4G08850 38.824 3.95e-153 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi14g1816 Pkinase 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1816 - - vvi:100268107 1665.2