Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1814 ATGCATGTTTCTAGACTTCTAGTTTACAAATATATGGAGAAAGGAAGCTTGTATTGTATGCTGAGGGATGAAGTTGAGGTTGTGGAATTGGATTGGATTAAGAGGGTGAATGTGGTCAAAGGCATTGTCAATGCTTTATCCTACATGCATCATGACTACAACTTGCCCATCATTCATCGAGACATATCAAGTAACAATATTTTGTTGGATTCTAAGCTTGAAGCTTTCGTATCGGATTTTGGCACTGCAAGACTGTTAGATCCCGACTCATCCAATCAAACCCTTCTTGTAGGCACTTACGGTTATATTGCACCAGAGCTTGCTTATACTATGGTTGTGACCGAAAAATGCGACGTTTATAGCTTTGGGATGGTTGCATTGGAAACAATGATGGGAATGCATCCAGGAGAACTTGTCACCTCATTATCATCTTCATCAACTCAAAACACAACATTAAAGGATGTATTAGATTCACGTCTTTCATCTCCTAAAAGTACAAGAGTTGCTAATAATGTAGCTCTTATTGTGTCATTGGCGCTCAAATGTCTCCATTCTAATCCACATTTTCGTCCATCCATGCAAGAAGTGTCTTTGAAACTTGTTTCTACAAAGTCATTCCCACAACCCATTAGTGCAATATCACTTTTGCAACTAAAAGACGAAGTTATTTAA 672 0.3824 MHVSRLLVYKYMEKGSLYCMLRDEVEVVELDWIKRVNVVKGIVNALSYMHHDYNLPIIHRDISSNNILLDSKLEAFVSDFGTARLLDPDSSNQTLLVGTYGYIAPELAYTMVVTEKCDVYSFGMVALETMMGMHPGELVTSLSSSSTQNTTLKDVLDSRLSSPKSTRVANNVALIVSLALKCLHSNPHFRPSMQEVSLKLVSTKSFPQPISAISLLQLKDEVI* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1814 223 FunFam Uncharacterized protein 49 215 - -
Vvi14g1814 223 PIRSF ILK 2 206 - -
Vvi14g1814 223 Pfam Protein kinase domain 4 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1814 223 ProSitePatterns Tyrosine protein kinases specific active-site signature. 57 69 IPR008266 GO:0004672|GO:0006468
Vvi14g1814 223 Gene3D Transferase(Phosphotransferase) domain 1 1 217 - -
Vvi14g1814 223 PANTHER LEUCINE RICH REPEAT KINASE 2 5 206 - -
Vvi14g1814 223 SUPERFAMILY Protein kinase-like (PK-like) 5 198 IPR011009 -
Vvi14g1814 223 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1814 Vvi-Chr14 29100720 29101553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1814 4 200 Receptor kinase-like Gene Family AT1G72180 40.865 5.04e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi14g1814 Pkinase 7.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1814 - - vvi:100244032 390.578