Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1811 ATGGTGTCCTCCGTTATTATTTCTACAGCAGTGGTAATAGTTACCAGTACCATGATGATGATGTTATTCTCCCTTGCCAAAGCAATATCATCACCATCTTCATCAACTGATGAGGCAGAGGCTCTGCGCAGCACCGGTTGGTGGAATTCTACCTCTGCTCATTGCCACTGGGATGGTGTATATTGCAATAATGCCGGAAGAGTGACTGGAATCGCCCTTTACGGTTCAGGAAAAGAATTGGGTGAGCTTAGCAAATTGGAGTTTTCTTCATTTCCCAGCCTGGTTGAGCTCAACCTTTCTGCCTGTGGACTCAATGGTAGCATCCCGCACCAAATAGGTACTCTTACTCAACTCACTGTTCTTTCTCTCCATGATAACAATCTTACAGGTGAGATACCTCTGTCCTTGGCTAACCTCACTCAGTTGCTCTACCTCACCCTTTGTTCTAATCCACTACATGGTTCGATTCCTCCTGAAATTGGGAAAATGAAGAATCTGATTTTTTTGGATTTGGGTTATAGCAACCTTATTGGTGTCATCCCTTCATCTTTTGGTAATCTTACCACTTTGACTACTCTCTATCTTGATGGTAATCAAATAAGTGGTTTTATCCCTCCTCAAATTGGGAAAATGAAGAATCTGAAGTCGCTTTTACTTTCTTATAATGGACTACATGGTCCAATTCCTCCCGAAATTGGGAAAATGAAGAATCTGAATAAGTTGAATCTGGGTTATAACAACCTTACTGGTGTCATCCCTTCATCTTTTGGTAATCTTACCAATATGAATTCTCTTTCTTTTCGAGGTAATCAAATCAGTGGTTTTATTCCTCCTGAAATTGGGCATCTTTTGAATTTATCATATTTAGATCTCAGTGAGAATCAAATCAGTGGTTTCATCCCCGAAGAAATGGTAAATTTGAAGAAATTGAGTCATCTAGACATGAGTAATAACTTAATAAGTGGAAAGATACCTTCACAGTTGGGAAATTTGAAAGAAGTAAAATACTTCAATCTCTCCCACAATAACCTCTCTGGCACCATTCCTTATTCTATTTCTAGTAACTACAGATGGACATTGATTGATTTATCAAACAATCGGTTGGAGGGTCAAGCTAGAGCTCCGGTAGAGGCATTTGGCCACAACAAAGGTCTATGTGGTGAAATCAAAGGTTGGGCACGATGCAAGAAAAGGCACCAAATCACACTCATCATTGTTGTTTCTTTATCTACAACCTTGTTGCTTTCAGTTGCAATCCTTGGTTTTCTCTTCCATAAACGAAGGATCAGAAAAAATCAATTACTCGAGACAACAAAGGTGAAAAATGGAGATCTATTTTCCATATGGGACTTCGATGGTGTGATTGCTTATCAAGACATCATCCAAGCAACCGAAGATTTTGACATCAAATACTGCATAGGCACGGGAGGCTATGGGAGCGTTTATAGAGCACAACTACCTTCCGGGAAGGTGGTTGCCTTGAAAAAACTTCATGGATGGGAAAGAGAGGATCCAACTTACTTGAAAAGCTTTGAAAATGAAGTTCAAATGCTAACAAGAATACGACATCGTAATATTGTGAAACTTCATGGCTTTTGTCTACATAAGAGATGCATGTTTCTAGTTTACAAATATATGGAGAAAGGAAGCTTGTATTGTATGCTAAGGGATGAAGTTGAGGCTGTGGAATTGGATTGGATTAAGAGGGTGAATGTTGTTAAAAGCATTGCTAATGCTTTATCCTACATGCATCATGACTGCGACTTGCCCATCATTCACCGAGACATATCAAGTAATAACATTCTTTTGGACTCTAAGCTTGAAGCTTTTGTGTCGGATTTTGGCACTGCAAGATTGTTAGATAATGATTCATCCAATCGAACCCTTCTTGCAGGCACTTACGGTTATATTGCACCAGAGCTTGCTTATACTATGGTTGTGACTGAAAAATGTGACGTTTATAGCTTTGGGATGGTTGCATTGGAGACGATGATGGGAATGCATCCAGGAGAATTTATCACCTCATTATCATCTTCATCAACTCAAAACACAACGTTAAAGGATGTATTGGATTCACGTCTTTCATCTCCTAAAAGTACACGAGTTGCTAATAACATAGCTCTTATAGTGTCATTGGCGCTCAAATGTCTCCATTTTAATCCACAATTTTGTCCATCCATGCAAGAAGTGTCTTCGAAACTTGTTTCTACAAGGTCATTCCCACAACCCATCAGTGCAATATCACTTTTGCAACTAAAAGATGAAATGGTGTCCTCCGTTATTATTTCTACAGCAGTGGTAATAGTTACCAGTACCATGATGATGATGTTATTCTCCCTTGCCAAAGCAATATCATCACCATCTTCATCAACTGATGAGGCAGAGGCTCTGCGCAGCACCGGTTGGTGGAATTCTACCTCTGCTCATTGCCACTGGGATGGTGTATATTGCAATAATGCCGGAAGAGTGACTGGAATCGCCCTTAACGGTTCAGGAAAAGAATTGGGTGAGCTTAGCAAATTGGAGTTTTCTTCATTTCCCAGCCTGGTTGAGCTCAACCTTTGTGCCTGTGGACTCAATGGTAGCATCCCGCACCAAATAGGTACTCTTACTCAACTCACTGTTCTTTCTCTCCATGATAACAATCTTACAGGTGAGATACCTCTGTCCTTGGCTAACCTCACTCAGTTGCTCTACCTCACCCTTTGTTCTAATCCACTACATGGTTCGATTCCTCCTGAAATTGGGAAAATGAAGAATCTGATTTTTTTGGATTTGGGTTATAGTAACCTTATTGGTGTCATCCCTTCATCTTTTGGTAATCTTACCACTTTGACTACTCTCTATCTTGATGGTAATCAAATAAGTGATCTCAGTGAGAATCAAATCAGTGGTTTCATCCCCGAAGAAATAGTAAATTTGAAGAAATTGAGTCATCTAGACATGAGTAATAACTTAATAAGTGGAAAGATACCTTCACAGTTGGGAAATTTGAAAGAAGTAAAATACTTCAATCTCTCCCACAATAACCTCTCTGGCACCATTCCTTATTCTATTTCTAGTAACTACAACAAATGGACATTGATTGATTTATCAAACAATCGGTTGGAGGGTCAAACTAGAGCTCCGGTAGAGGCATTTGGCCACAACAAAGGTCTATGTGGTGAAATCAAAGGTCGGCCACGATGCAAGAAAAGGCACCAAATCACACTCATCATTGTTGTTTCTTTATCTACAACCTTGTTGCTTTCAATTGCAATCCTTGGTTTTCTCTTCCATAAACGAAGGATCAGAAAAAATCAATTACTCGAGACAACAAAGGTGAAAAATGGAGATCTATTTTCCATATGGGACTATGATGGTGTGATTGCTTATCAAGACATCATCCAAGCAACCGAAGATTTTGACATCAAATACTGCATAGGCACGGGAGGCTATGGGAGCGTTTACAGAGCACAACTACCTTCCGGGAAGGTGGTTGCCTTGAAAAAACTTCATGGATGGGAAAGAGGGGATCCAACTTACTTGAAAAGCTTTGAAAATGAAGTTCAAATGCTAACAAGAATACGACATCGTAATATTGTGAAACTTCATGGCTTTTGTCTACATAAGAGATGCATGTTTCTAGTTTACAAATATATGGAGAAAGGAAGCTTGTATTGTATGCTAAGGGATGAAGTTGAGGCTGTGGAATTGGATTGGATTAAGAGGGTGAATGTTGTTAAAAGCATTGCTAATGCTTTATCCTACATGCATCATGACTGCGACTTGCCCATCATTCATCGAGACATATCAAGTAATAACATTCTTTTGGACTCTAAGCTTGAAGCTTTTGTTTCGGATTTTGGCACTGCAAGATTGTTAGATAATGATTCATCCAATCGAACCCTTCTTGTAGGCACTTATGGTTATATTGCACCAGAGCTTGCTTATACTATGGTTGTGACTGAAAAATGTGACATTTATAGCTTTGGGATGGTTGCATTGGAGACAATGATGGGAATGCATCCAGGAGAATTTGTCACCTCATTATCATCTTCATCAACTCAAAACACAACGTTAAAGGATGTATTAGATTCACGTCTTTCATCTCCTAAAAGTACACAAGTTGCTAATAACATAGCTCTTATAGTGTCATTGGCGCTCAAATGTCTCCATTCTAATCCACAATTTCGTCCATCCATGCAAGAAGTGTCTTCGAAACTTGTTTCTACAAGGTCATTCCCACAACCCATCAGTACAATATCACTTTTGCAACTAAAAGATGAAGTTATTTAA 4278 0.3932 MVSSVIISTAVVIVTSTMMMMLFSLAKAISSPSSSTDEAEALRSTGWWNSTSAHCHWDGVYCNNAGRVTGIALYGSGKELGELSKLEFSSFPSLVELNLSACGLNGSIPHQIGTLTQLTVLSLHDNNLTGEIPLSLANLTQLLYLTLCSNPLHGSIPPEIGKMKNLIFLDLGYSNLIGVIPSSFGNLTTLTTLYLDGNQISGFIPPQIGKMKNLKSLLLSYNGLHGPIPPEIGKMKNLNKLNLGYNNLTGVIPSSFGNLTNMNSLSFRGNQISGFIPPEIGHLLNLSYLDLSENQISGFIPEEMVNLKKLSHLDMSNNLISGKIPSQLGNLKEVKYFNLSHNNLSGTIPYSISSNYRWTLIDLSNNRLEGQARAPVEAFGHNKGLCGEIKGWARCKKRHQITLIIVVSLSTTLLLSVAILGFLFHKRRIRKNQLLETTKVKNGDLFSIWDFDGVIAYQDIIQATEDFDIKYCIGTGGYGSVYRAQLPSGKVVALKKLHGWEREDPTYLKSFENEVQMLTRIRHRNIVKLHGFCLHKRCMFLVYKYMEKGSLYCMLRDEVEAVELDWIKRVNVVKSIANALSYMHHDCDLPIIHRDISSNNILLDSKLEAFVSDFGTARLLDNDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGMVALETMMGMHPGEFITSLSSSSTQNTTLKDVLDSRLSSPKSTRVANNIALIVSLALKCLHFNPQFCPSMQEVSSKLVSTRSFPQPISAISLLQLKDEMVSSVIISTAVVIVTSTMMMMLFSLAKAISSPSSSTDEAEALRSTGWWNSTSAHCHWDGVYCNNAGRVTGIALNGSGKELGELSKLEFSSFPSLVELNLCACGLNGSIPHQIGTLTQLTVLSLHDNNLTGEIPLSLANLTQLLYLTLCSNPLHGSIPPEIGKMKNLIFLDLGYSNLIGVIPSSFGNLTTLTTLYLDGNQISDLSENQISGFIPEEIVNLKKLSHLDMSNNLISGKIPSQLGNLKEVKYFNLSHNNLSGTIPYSISSNYNKWTLIDLSNNRLEGQTRAPVEAFGHNKGLCGEIKGRPRCKKRHQITLIIVVSLSTTLLLSIAILGFLFHKRRIRKNQLLETTKVKNGDLFSIWDYDGVIAYQDIIQATEDFDIKYCIGTGGYGSVYRAQLPSGKVVALKKLHGWERGDPTYLKSFENEVQMLTRIRHRNIVKLHGFCLHKRCMFLVYKYMEKGSLYCMLRDEVEAVELDWIKRVNVVKSIANALSYMHHDCDLPIIHRDISSNNILLDSKLEAFVSDFGTARLLDNDSSNRTLLVGTYGYIAPELAYTMVVTEKCDIYSFGMVALETMMGMHPGEFVTSLSSSSTQNTTLKDVLDSRLSSPKSTQVANNIALIVSLALKCLHSNPQFRPSMQEVSSKLVSTRSFPQPISTISLLQLKDEVI* 1426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1811 1425 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 395 - -
Vvi14g1811 1425 SUPERFAMILY Protein kinase-like (PK-like) 1114 1402 IPR011009 -
Vvi14g1811 1425 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 104 736 - -
Vvi14g1811 1425 SMART LRR_typ_2 259 283 IPR003591 -
Vvi14g1811 1425 SMART LRR_typ_2 974 998 IPR003591 -
Vvi14g1811 1425 SMART LRR_typ_2 187 211 IPR003591 -
Vvi14g1811 1425 SMART LRR_typ_2 870 893 IPR003591 -
Vvi14g1811 1425 SMART LRR_typ_2 894 918 IPR003591 -
Vvi14g1811 1425 SMART LRR_typ_2 307 331 IPR003591 -
Vvi14g1811 1425 SMART LRR_typ_2 942 965 IPR003591 -
Vvi14g1811 1425 SMART LRR_typ_2 235 258 IPR003591 -
Vvi14g1811 1425 SMART LRR_typ_2 139 163 IPR003591 -
Vvi14g1811 1425 SMART LRR_typ_2 115 138 IPR003591 -
Vvi14g1811 1425 Pfam Leucine rich repeat N-terminal domain 800 818 IPR013210 -
Vvi14g1811 1425 Pfam Leucine rich repeat N-terminal domain 45 63 IPR013210 -
Vvi14g1811 1425 Gene3D Phosphorylase Kinase; domain 1 428 545 - -
Vvi14g1811 1425 Gene3D Phosphorylase Kinase; domain 1 1096 1213 - -
Vvi14g1811 1425 Gene3D Ribonuclease Inhibitor 269 395 IPR032675 -
Vvi14g1811 1425 Gene3D Ribonuclease Inhibitor 956 1063 IPR032675 -
Vvi14g1811 1425 ProSiteProfiles Protein kinase domain profile. 1135 1409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1811 1425 Gene3D Transferase(Phosphotransferase) domain 1 1214 1411 - -
Vvi14g1811 1425 Gene3D Transferase(Phosphotransferase) domain 1 546 743 - -
Vvi14g1811 1425 Gene3D Ribonuclease Inhibitor 19 173 IPR032675 -
Vvi14g1811 1425 Gene3D Ribonuclease Inhibitor 774 955 IPR032675 -
Vvi14g1811 1425 SUPERFAMILY Protein kinase-like (PK-like) 446 734 IPR011009 -
Vvi14g1811 1425 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 955 1063 - -
Vvi14g1811 1425 Pfam Leucine rich repeat 169 224 IPR001611 GO:0005515
Vvi14g1811 1425 Pfam Leucine rich repeat 237 296 IPR001611 GO:0005515
Vvi14g1811 1425 FunFam Leucine-rich repeat receptor protein kinase MSP1 1098 1213 - -
Vvi14g1811 1425 Pfam Leucine Rich repeats (2 copies) 919 960 IPR025875 -
Vvi14g1811 1425 ProSiteProfiles Protein kinase domain profile. 467 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1811 1425 SMART LRR_sd22_2 187 202 - -
Vvi14g1811 1425 SMART LRR_sd22_2 942 960 - -
Vvi14g1811 1425 SMART LRR_sd22_2 974 1000 - -
Vvi14g1811 1425 SMART LRR_sd22_2 870 891 - -
Vvi14g1811 1425 SMART LRR_sd22_2 283 298 - -
Vvi14g1811 1425 SMART LRR_sd22_2 307 333 - -
Vvi14g1811 1425 SMART LRR_sd22_2 211 240 - -
Vvi14g1811 1425 SMART LRR_sd22_2 259 274 - -
Vvi14g1811 1425 SMART LRR_sd22_2 115 136 - -
Vvi14g1811 1425 FunFam MDIS1-interacting receptor like kinase 2 546 740 - -
Vvi14g1811 1425 SUPERFAMILY L domain-like 43 373 - -
Vvi14g1811 1425 Pfam Protein kinase domain 471 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1811 1425 Pfam Protein kinase domain 1139 1399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1811 1425 FunFam Leucine-rich repeat receptor protein kinase MSP1 430 545 - -
Vvi14g1811 1425 FunFam MDIS1-interacting receptor like kinase 2 1214 1408 - -
Vvi14g1811 1425 ProSitePatterns Protein kinases ATP-binding region signature. 473 495 IPR017441 GO:0005524
Vvi14g1811 1425 ProSitePatterns Tyrosine protein kinases specific active-site signature. 591 603 IPR008266 GO:0004672|GO:0006468
Vvi14g1811 1425 Gene3D Ribonuclease Inhibitor 174 268 IPR032675 -
Vvi14g1811 1425 FunFam Uncharacterized protein 30 173 - -
Vvi14g1811 1425 FunFam Nuclear pore complex protein NUP107 174 277 - -
Vvi14g1811 1425 SUPERFAMILY L domain-like 798 1039 - -
Vvi14g1811 1425 ProSitePatterns Protein kinases ATP-binding region signature. 1141 1163 IPR017441 GO:0005524
Vvi14g1811 1425 ProSiteProfiles Leucine-rich repeat profile. 944 965 IPR001611 GO:0005515
Vvi14g1811 1425 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1259 1271 IPR008266 GO:0004672|GO:0006468
Vvi14g1811 1425 FunFam Uncharacterized protein 785 932 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1811 Vvi-Chr14 29045071 29058706 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1811 79 639 Receptor kinase-like Gene Family AT4G08850 40.063 5.53e-123 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi14g1811 Pkinase 7.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1811 - - vvi:100248942 1437.55