Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi14g1799 | ATGGGGAAATCTCCTGGAAAATGGATCAAGACCCTACTTTTTGGGAAGAAATCGTCCAAATCTAATTTTTCAAAAAAAGCTGCAACTGAAAGAGAGGCATTTATTGCTGTTAAGGCCCAGTCAGGTGATTTGGCTTTGGATCCTCCAGTGGTTTCAGTCCCAGCACCCCATACCACTGACAGAAGTGGAGGGAACTTGGTGTTAGAAAGGGCAACAACTGACAACTTGCCACATGATGTGGTTTTGTTATCACCTGGAAGTCAAGATGTTGATACAAAAGCAAATGTGGAGTTGGGACTACCAAACAACACAGACATAATCAGGCTAGAGCAAGCTGCTACAAAAGCACAGGCTGCTTTTAGGGGCTATTTGGCTCGCAGGGCATTTCGGGCCCTCAAGGGCATCATAAGGCTGCAAGCACTTGTTCGTGGGCACTTGGTTAGGAGACAGGCTGTTGCTACTTTACTATGTGTGCAGGGGATTGTGAAATTACAGGCACTGATTCGTGGTCAAAGAGTCAGACTTTCAGATGCAGGACTTGAAGTGCATAAGAAATGCAGTCTGGGAAAGCCTCTGGACGACAAAGAGGTGGTTTCAGGTGGAGTAAATAAATCCACTCAACCGAAGGAGCTATCACCAAATGCTTTTGTTAATAAGCTTCTTGCTTCATTGCCTACTGCTCTGCCCTTGAAACTCCAATATGATCCAGTTGACCCAAACTCAGCTGCAAACTGGGTAGAACGCTGGTCATTGTCTTTCTTCTGGAAACCACTTCCACAACCTAAGAAGGTTGACAACTTGAAGTCTCAGAGAAAGCAGGGTAACATTCAAAGTGGAGAATCAGAGGTGGGAAGGCCAAAACGAGGTAGCCGGAGGGTTTCCACTGTGAGTGTTGAGAATAACTCATTGCTTTCCTCATCTGAATATGAAAAACCCAAACGTACCCAGAGGAAATCTTTGAGCCATCAAGCAGAAACAGTGCAGGATCATCCTCAAAGTGAACTTGAGAGGGTTAAACGCAATTTGAGAAAAGTTTCTGCATCTGTAACAGAGGTTCCTGATAAGATGGAAGCTGTAACTGAGAAACCAAAGCAGAGTCAAAGAAAGGTTTCAGGCTTTCCAGCTCCTGATGTTTCAGAACAGAGCATGAACTTTTCTTCTGAAAAAACAGGTCCCCCACCAGTAGCAGTGTCCAAAGAGTCCAAACAGACTGATATAGAACCACATTCAAAACTGTCCAAAGAACCCAAAGAGACTGATGCAGAACTGTCTCGAAACCTGTCCAAAGAACTCAAACAGACTGATACAGAACCATCTCCAAAGTTGTCCATAGAACCCAAACAGACTGAGGGAGAAACACATCCAAAACTTTCTGGAGAACTTGAACAGACTGAGCTGGAATTACCTCCAAAACCTTTAGCATTGGATGAGATAGTTGATGTGTCACAAGATCACCTTCTTGCTGTTGAGGCACATCCTTTAGAAAATGGTGGGAAAGTTGAGAACACTCCTGTGGTGAATGAGGAGATAAGCTGTATGGAGGATCAAACTACCAAGGATAACAAGAGAACCAGGAGGAGGAAATCTTTGCCAGCAAAGCAGGAATGCTCAGAGAATGTTTCACATAACACTCCCACCTTGCCAAGCTATATGGCAGCAACTGAATCTGCAAAGGCAAAGCTTAGAGCACAAGGATCACCAAGATTTGGTCAAGATGGATCTGAAAATGGTTTTGTCAGACGGCATTCTCTGCCTTCTTCCACCAATGGTAAATTGAGCTCAATGTCACCTCGAGTGCAGAGGCTGGTTCAAGCAAGTGGCAAAGGAGGATCCAAAAATGACAGATCACTTTTGTCCTCTAGAGATTGTCATGAGAAGGTGGTCCAGACTGAGTGGAGGAGGTGA | 1905 | 0.4462 | MGKSPGKWIKTLLFGKKSSKSNFSKKAATEREAFIAVKAQSGDLALDPPVVSVPAPHTTDRSGGNLVLERATTDNLPHDVVLLSPGSQDVDTKANVELGLPNNTDIIRLEQAATKAQAAFRGYLARRAFRALKGIIRLQALVRGHLVRRQAVATLLCVQGIVKLQALIRGQRVRLSDAGLEVHKKCSLGKPLDDKEVVSGGVNKSTQPKELSPNAFVNKLLASLPTALPLKLQYDPVDPNSAANWVERWSLSFFWKPLPQPKKVDNLKSQRKQGNIQSGESEVGRPKRGSRRVSTVSVENNSLLSSSEYEKPKRTQRKSLSHQAETVQDHPQSELERVKRNLRKVSASVTEVPDKMEAVTEKPKQSQRKVSGFPAPDVSEQSMNFSSEKTGPPPVAVSKESKQTDIEPHSKLSKEPKETDAELSRNLSKELKQTDTEPSPKLSIEPKQTEGETHPKLSGELEQTELELPPKPLALDEIVDVSQDHLLAVEAHPLENGGKVENTPVVNEEISCMEDQTTKDNKRTRRRKSLPAKQECSENVSHNTPTLPSYMAATESAKAKLRAQGSPRFGQDGSENGFVRRHSLPSSTNGKLSSMSPRVQRLVQASGKGGSKNDRSLLSSRDCHEKVVQTEWRR* | 635 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi14g1799 | 634 | MobiDBLite | consensus disorder prediction | 447 | 461 | - | - | |
| Vvi14g1799 | 634 | MobiDBLite | consensus disorder prediction | 293 | 309 | - | - | |
| Vvi14g1799 | 634 | MobiDBLite | consensus disorder prediction | 580 | 614 | - | - | |
| Vvi14g1799 | 634 | MobiDBLite | consensus disorder prediction | 615 | 634 | - | - | |
| Vvi14g1799 | 634 | ProSiteProfiles | IQ motif profile. | 133 | 160 | IPR000048 | GO:0005515 | |
| Vvi14g1799 | 634 | ProSiteProfiles | IQ motif profile. | 109 | 137 | IPR000048 | GO:0005515 | |
| Vvi14g1799 | 634 | MobiDBLite | consensus disorder prediction | 402 | 436 | - | - | |
| Vvi14g1799 | 634 | Gene3D | - | 107 | 180 | - | - | |
| Vvi14g1799 | 634 | MobiDBLite | consensus disorder prediction | 377 | 391 | - | - | |
| Vvi14g1799 | 634 | MobiDBLite | consensus disorder prediction | 262 | 469 | - | - | |
| Vvi14g1799 | 634 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 593 | - | - | |
| Vvi14g1799 | 634 | MobiDBLite | consensus disorder prediction | 310 | 344 | - | - | |
| Vvi14g1799 | 634 | MobiDBLite | consensus disorder prediction | 496 | 634 | - | - | |
| Vvi14g1799 | 634 | MobiDBLite | consensus disorder prediction | 534 | 551 | - | - | |
| Vvi14g1799 | 634 | Pfam | IQ calmodulin-binding motif | 133 | 150 | IPR000048 | GO:0005515 | |
| Vvi14g1799 | 634 | Pfam | IQ calmodulin-binding motif | 111 | 130 | IPR000048 | GO:0005515 | |
| Vvi14g1799 | 634 | SMART | iq_5 | 131 | 152 | IPR000048 | GO:0005515 | |
| Vvi14g1799 | 634 | SMART | iq_5 | 108 | 130 | IPR000048 | GO:0005515 | |
| Vvi14g1799 | 634 | Pfam | Protein of unknown function (DUF4005) | 534 | 610 | IPR025064 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi14g1799 | Vvi-Chr14 | 28945036 | 28950880 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vvi14g1799 | 1 | 634 | IQD Protein Family | AT1G74690 | 39.545 | 2.73e-108 | 337 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi14g1799 | - | - | vvi:100245639 | 1217.99 |