Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1795 ATGATTAAGGAGACTTTACTCCTAATTAATCTTCATGCCTCTTCTAACTCAAACATAAAAGACCAATATTTTATTAACAAAGATGTAGTATATATTTATATATATAAAGCACTTTTTTCAAGAACAAGGAAAGTCCAAGTCAAGTCTTCTGTTTTCCAACAAGAGCCATTTCCATACAACACTATTAAAGTCACTTTGATCTTATACCTCGTCATGGCTTTGGGGTTCATCTTGGAGGCCATCTCCTTCTTCTTGTTCCAATTGTATTCCAAATCATTTGCTGAGCTGATAACAGCCCTTCCAGGACAACCTGCCAATGTTTCTTTCAAGCAGTACTCTGGTTACATTGCGACAGATGATCAACATGGTCGAGCCCTGTTCTATTACTTTGTTGAAGCTGAAACGGCCCACCCACTTTCGCGTCCCTTAACTCTGTGGCTCAATGGAGGCCCTGGTTGTTCTTCACTTGGTTTTGGTGCATTCATGGAAAATGGCCCTTTCCAACCAGGAGAGAATGGGATTCTTGTCAAGAACAAACATTCATGGAATATAGAATCAAACATGTTATATGTGGAGTCACCAATTGGGGTTGGATTTTCATACTCAAATACAAGCTCAAATTACTTTTGGAATGATACCAGGACAGCTGAAGACAATTTGAGGTTTATTGTTAACTGGTTCGAAGAATTCCCATACTACAAAGACTCAGAATTGTTTCTAACTGGTGAAAGTTATGCAGGTCACTACATTCCACAGCTTGCAGCCTTGTTAGTAGAGTACAACAAGAGGCCTAACATCAGACCCATAAAGCTCAAAGCCATTGCTCTTGGGAATCCACTCCTAGACTTGGACATTAGTGTGCTTGCTGGTGATTACTTATGGTCACATGGTGCCATATCAGATGACACACTACTGTTGGAGAAGACGGTCTGTAATGACTCCAAGTATCTAAGGGAGTACTATCATGGTCAATTGTCTAAGGAATGCAAAGATGTGTTCAACAGAGTATTAGACGAAATAAGCGGTGATGTTGAGAAGGGCGACCTCCTCATGCCTAAATGCTTGTCATCAAATTCTGCTCAGCAATTTAGACTGAAAGGCCTGCAAGGGAAGATCTATGCAGAGATTGATAGGAGGACCAGAGGAACAATACCTGATCCATGCCTTCCTGATAGGATATTTACCTATCTAAACAACCCTCAAGTTCAAAAAGCACTCCATGCCAATACAACTCACCTTCCATACTATTGGGACTTCTGTTCAGGGCCTCTGGTGTATCAAGTAGATAATTTGGACATGGACCTTCTACCCCTCATTGCATACCTACTTGAACAGAACATTCGCATATTGCTTTACAGTGGTGACCAGGATGCAAAAGTCCCTCTCACTCAAACCAGGTTAATCACGAATAATCTGGCTAAGGACCTGAAGCTAGTCCCTTTCACAAAATATGGCACTTGGTATGATAAGGAGCAGGTTGGAGGATGGTCACAATCATTTGGTAGACTGAGAGATGGGATGAATTTGACATTGCTTACGTTCGCAACTGTTCGAGGAGCAGCTCATGAGGTCCCCTTCACATCCCCTTCCCAAGCACTCACTTTGTTCAAGTCATTCCTCAGTGGCTCCCCACCTCCTAGGCTCCATGAATGA 1653 0.4198 MIKETLLLINLHASSNSNIKDQYFINKDVVYIYIYKALFSRTRKVQVKSSVFQQEPFPYNTIKVTLILYLVMALGFILEAISFFLFQLYSKSFAELITALPGQPANVSFKQYSGYIATDDQHGRALFYYFVEAETAHPLSRPLTLWLNGGPGCSSLGFGAFMENGPFQPGENGILVKNKHSWNIESNMLYVESPIGVGFSYSNTSSNYFWNDTRTAEDNLRFIVNWFEEFPYYKDSELFLTGESYAGHYIPQLAALLVEYNKRPNIRPIKLKAIALGNPLLDLDISVLAGDYLWSHGAISDDTLLLEKTVCNDSKYLREYYHGQLSKECKDVFNRVLDEISGDVEKGDLLMPKCLSSNSAQQFRLKGLQGKIYAEIDRRTRGTIPDPCLPDRIFTYLNNPQVQKALHANTTHLPYYWDFCSGPLVYQVDNLDMDLLPLIAYLLEQNIRILLYSGDQDAKVPLTQTRLITNNLAKDLKLVPFTKYGTWYDKEQVGGWSQSFGRLRDGMNLTLLTFATVRGAAHEVPFTSPSQALTLFKSFLSGSPPPRLHE* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1795 550 Pfam Serine carboxypeptidase 101 542 IPR001563 GO:0004185|GO:0006508
Vvi14g1795 550 ProSitePatterns Serine carboxypeptidases, serine active site. 240 247 IPR018202 GO:0004185
Vvi14g1795 550 SUPERFAMILY alpha/beta-Hydrolases 97 544 IPR029058 -
Vvi14g1795 550 Gene3D - 435 542 - -
Vvi14g1795 550 Gene3D alpha/beta hydrolase 89 366 IPR029058 -
Vvi14g1795 550 Gene3D - 388 424 - -
Vvi14g1795 550 PRINTS Carboxypeptidase C serine protease (S10) family signature 191 201 IPR001563 GO:0004185|GO:0006508
Vvi14g1795 550 PRINTS Carboxypeptidase C serine protease (S10) family signature 512 525 IPR001563 GO:0004185|GO:0006508
Vvi14g1795 550 PRINTS Carboxypeptidase C serine protease (S10) family signature 226 251 IPR001563 GO:0004185|GO:0006508
Vvi14g1795 550 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 190 IPR001563 GO:0004185|GO:0006508
Vvi14g1795 550 FunFam Carboxypeptidase 91 356 - -
Vvi14g1795 550 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 96 529 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1795 Vvi-Chr14 28916144 28920477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1795 396 544 Calmodulin-binding Proteins AT2G22960 24.342 7.24e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1795 K16297 - vvi:100261014 986.097