Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1784 ATGAAGACTACTTTCATATTTAGTAATTTGGTGGTGGTGGTGGTGGTGATGGTGATGATGAACATGGTGTTCACACATGGTGCTCATGTTCATCCTTCTTCTAATCAATCACAGGTTGAGAAGGAAGCACTGCTTGAGTCCGGTTGGTGGAGTGGGGAGACTGATCATGATCATGATTCTGATCATTGCGACTGGTCTGGCATAACTTGCAACGAGGAGGGACATGTCATTGCAGTTTACTATAGAGCCAGCGGTGAACTTAGCAAACTAAAGTTTTCTTCATTTCCCAGCCTCAGAACCATCGATCTTCACGACGGTAGACTCAGTGGCAGAATCCCACACCAAATAGGTTCTCTTACTAAGGTCATTTATCTTGATCTCTCTCGTAATGAACTCAGTGGTAGTATCCCAGACCAAATAGCTACTCTTACTAAGCTCACTTACCTTGATCTCTCTAGGAATGAACTCAGTGGTAGCATACCGCCCCAAATAAACACTCTTACTAGCCTCAACTACCTCGATCTTTCCCATAATGAGCTCAATGGTAGGATCCCGCAACAAATAGGAACTCTTATTAGACTCACCCACCTCGATCTCTATAGCAATGAACTTAGCGGTAGCATCCCAGACGAGATAGATACTCTTACTGAACTCGCCTACCTCGATCTCTCTAACAATGTACTCAATGGCAGCATCCCACACCAACTAGGTGCTCTCGCTAAACTCACCTACTTTGATCTCTCTTGGAATGAACTCAGTGGTGACATCCCTTCATCTTTTGGCCATCTTTCCAATTTAATTTCTCTATGTCTCAATAATAATCAAATCAACGGCCCCATCCCTGAAGATATTGGAAACCTCGAGGACTTGGTTGATTTGGACTTAAGTAGTAACTCGATCAGTGGGAAGATACCATCCCAAATCCAAAACTTGAAGAGGTTAGAGAACTTGAATCTCTCTCGTAACAAACTTTCAGGTGCCATTCCTCCCTCGCTTACCTATGACTACAAGTGGACATCCATTGATTTATCATACAATGATTTGGAGGGTCACATACCCTTCGAATTGCAGTTTGAATCTCCCCCGGGGGTATTTGAGCACAACAAACATTTATGTGGAGAAATCAGACACTGGCCACACTGCAAAAAGGGACAAAAAATCACGCTCATCCTTGTTATTTCTCTACTTGCCACCTTGTGCATTGCATTTGCATTTCTTAAATTTCTCCTCCTTCCAAGAAAGATGAGAAAAATGCGACACATGTCAGCAAGCGCAGCAGAAACAAGAAGGGGAGATTTGTTCTCCGTATGGGACTATGATGGAACAATTGCTTACCAAGACATAATCCAATCAACGGAGAATTTTGACATCAAATATTGTGTAGGTGTTGGAGGATATGGCAGCGTTTACAGGGCACAACTGCCATGTGGAAAAGTTGTAGCCTTGAAGAAGCTTCATGGATGGGAAAGGGAGGAGCCCACCTACCTGAAAAGTTTTGAAAATGAGGCACAAATATTGTCCAAGATACGACATCGAAACATTGTGAAACTTCATGGCTTCTGTTTACATAGAAGAAGCATGTTTTTGGTTTACCAGTTCATGGAACGGGGAAGCTTATTTTGCATGTTAAGCCATGAAGTTGAGGCTCTAGAGTTGGATTGGACTAAGAGGCTGAATGTTGTCAAAAGTATTGCCCATGCTTTATCTTACATGCATCATGATTGTTCCCCACCCATCATTCACAGGGACATATCAAGCAATAATGTCCTCTTGAATTCACAACTTGAAGCTTTTGTATCAGATTTTGGCACCGCTAGACTACTAGATCCTGATTCATCCATTCAGACTCTTCTTGTAGGCACTTATGGGTATATTGCACCAGAGCTTGCCTACACCATGACCGTAACTAAAAAATGCGATGTGTATAGTTTTGGAGTGGTGGCACTTGAGACAATGATGGGGAAACATCCAAGAGAAGTTATCACTTCATTGTCTTCCTCCTCGGGTCAAGATATATTGTTGAGGGATGTATTAGATCCACGTCTTGCACTTCCAGAAAACCCACAAGTTGCTAAAGATATAGTTTTTGTGGTGCTTTTGGCACTTAAATGCATCCATTCAAATCCACAATCCCGTCCAACAATGCAACAGATATCCTACAAGCTTCTTGGTGACATTCCATTTCCTAAATTGCCGTTTTATGCAATTTCACTTTATGGACTAAATCATGAAGAAAATGTAATTTAA 2247 0.4197 MKTTFIFSNLVVVVVVMVMMNMVFTHGAHVHPSSNQSQVEKEALLESGWWSGETDHDHDSDHCDWSGITCNEEGHVIAVYYRASGELSKLKFSSFPSLRTIDLHDGRLSGRIPHQIGSLTKVIYLDLSRNELSGSIPDQIATLTKLTYLDLSRNELSGSIPPQINTLTSLNYLDLSHNELNGRIPQQIGTLIRLTHLDLYSNELSGSIPDEIDTLTELAYLDLSNNVLNGSIPHQLGALAKLTYFDLSWNELSGDIPSSFGHLSNLISLCLNNNQINGPIPEDIGNLEDLVDLDLSSNSISGKIPSQIQNLKRLENLNLSRNKLSGAIPPSLTYDYKWTSIDLSYNDLEGHIPFELQFESPPGVFEHNKHLCGEIRHWPHCKKGQKITLILVISLLATLCIAFAFLKFLLLPRKMRKMRHMSASAAETRRGDLFSVWDYDGTIAYQDIIQSTENFDIKYCVGVGGYGSVYRAQLPCGKVVALKKLHGWEREEPTYLKSFENEAQILSKIRHRNIVKLHGFCLHRRSMFLVYQFMERGSLFCMLSHEVEALELDWTKRLNVVKSIAHALSYMHHDCSPPIIHRDISSNNVLLNSQLEAFVSDFGTARLLDPDSSIQTLLVGTYGYIAPELAYTMTVTKKCDVYSFGVVALETMMGKHPREVITSLSSSSGQDILLRDVLDPRLALPENPQVAKDIVFVVLLALKCIHSNPQSRPTMQQISYKLLGDIPFPKLPFYAISLYGLNHEENVI* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1784 748 Gene3D Phosphorylase Kinase; domain 1 416 533 - -
Vvi14g1784 748 SMART LRR_typ_2 215 239 IPR003591 -
Vvi14g1784 748 SMART LRR_typ_2 263 287 IPR003591 -
Vvi14g1784 748 SMART LRR_typ_2 143 166 IPR003591 -
Vvi14g1784 748 SMART LRR_typ_2 167 191 IPR003591 -
Vvi14g1784 748 SMART LRR_typ_2 311 335 IPR003591 -
Vvi14g1784 748 SMART LRR_sd22_2 191 214 - -
Vvi14g1784 748 SMART LRR_sd22_2 143 175 - -
Vvi14g1784 748 SMART LRR_sd22_2 287 319 - -
Vvi14g1784 748 SMART LRR_sd22_2 263 286 - -
Vvi14g1784 748 SMART LRR_sd22_2 239 254 - -
Vvi14g1784 748 FunFam Leucine-rich repeat receptor protein kinase MSP1 418 533 - -
Vvi14g1784 748 Gene3D Ribonuclease Inhibitor 284 362 IPR032675 -
Vvi14g1784 748 ProSitePatterns Protein kinases ATP-binding region signature. 461 483 IPR017441 GO:0005524
Vvi14g1784 748 Gene3D Ribonuclease Inhibitor 184 283 IPR032675 -
Vvi14g1784 748 FunFam MDIS1-interacting receptor like kinase 2 183 258 - -
Vvi14g1784 748 Gene3D Ribonuclease Inhibitor 34 183 IPR032675 -
Vvi14g1784 748 Gene3D Transferase(Phosphotransferase) domain 1 534 725 - -
Vvi14g1784 748 FunFam Leucine Rich Repeat family protein, expressed 260 358 - -
Vvi14g1784 748 SUPERFAMILY L domain-like 58 353 - -
Vvi14g1784 748 FunFam Uncharacterized protein 33 182 - -
Vvi14g1784 748 PRINTS Leucine-rich repeat signature 146 159 - -
Vvi14g1784 748 PRINTS Leucine-rich repeat signature 167 180 - -
Vvi14g1784 748 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 130 722 - -
Vvi14g1784 748 Pfam Protein kinase domain 460 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1784 748 SUPERFAMILY Protein kinase-like (PK-like) 440 720 IPR011009 -
Vvi14g1784 748 ProSitePatterns Tyrosine protein kinases specific active-site signature. 579 591 IPR008266 GO:0004672|GO:0006468
Vvi14g1784 748 ProSiteProfiles Protein kinase domain profile. 455 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1784 748 FunFam MDIS1-interacting receptor like kinase 2 534 727 - -
Vvi14g1784 748 Pfam Leucine rich repeat 241 300 IPR001611 GO:0005515
Vvi14g1784 748 Pfam Leucine rich repeat 96 156 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1784 Vvi-Chr14 28823611 28826085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1784 98 627 Receptor kinase-like Gene Family AT4G08850 40.476 1.03e-124 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi14g1784 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1784 - - vvi:100245787 1464.13