Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1783 ATGGAGTGTGTGGTATCTAGTGTTGTGGCGGTGCTGGTGGTGGTGCACACGGTGTCAATGACTCATGCTGCTGATCACTCACAGGTTGTGGCTGAGGCTGACGCTCTGCGCAACTCCGGTTGGTGGATATGGAGAGACCCAGATACCTCGAACCATTGCAGTTGGTCGGGCATAACTTGTAATGAGGCCAAACATGTCACTGGGATAAGATTACGAAATTATCAAGAACCCATAGGTGAGGTTAGTGAATTAAATCTTTCTTCACTTCCCAGCCTCAATTTTCTCATCCTTTCTAGAATGGGACTCAGTGGTAGCATATCAGACCAAATAGGTAGTCTTACAAAACTCACCATTCTTGATCTTTCTCATAATCAATTGACTGACCCCATCCCACACCAAATAGGTAGTCTTACTAAACTCACCCATCTTGATCTTTTTGATAATCAACTGACTGGTCCCATCCCACACCAAATAGGTAGTCTTACTAAACTCATCCATCTTGATCTTTCTAGTAATCAACTGACTGACTCCCTCCCACACCAAATAGGTACTCTTACAGAACTCACCTACCTTCACGTCTCTTCGAATGAACTCACTGGTCCCATCCCTTCATCTTTAGGCCGTCTTACTAAACTCACCCATCTTGATCTTTCTTATAATCAACTCAATGGTAGCATCCCACACCAAATAGGTACTCTCATAGAACTCACCTACCTTGACCTCTCTTGGGGTGAACTCACTGGTGCCATGCCTTCATCTTTAGGCTGTCTCACTAAGTTGACTTCTTTGGACCTTAGTATGAATCAAATCAATGGATCCATCCCTCCAGAAATTGGAAATCTTAAGGATCTAGTCACTTTAGACCTTTCTAATAATTTAATCAGTGGAGAGATACCTTCAAACCTGAAAATTTTGAAGAGATTATGGCTCTTAGATCTCTCGTATAATAGATTGTCAGGCAACGTCCCGTCCTTTATCACCAACAATTGCAACCAAACAACATTTGATTTATCCCAAAATGATGATTTGGAGGGTCATCCAGGTTACTCCATTTGCACTGGAGGACACGCAACCTCACTCACCCTTATCATCTCTTTGCCCCTCACCTTGTTTTTTGTAGCCTTGATACTGGGGTTCGCTTTTGGCCTTTGGTGGAAGAAAAGACAACTTCAACCAGAGTCAATGCCAGTAAAAAAAAGAAGAGGAGACTTGTTTTCCATATGGGACTATGATGGGAGAATTGCTTTTGAAGACATCATCTTGGCAACAGAGGATTTCGATATCAGATATTGCATAGGTGTTGGAGGCTATGGCAGTGTTTATAGAGCACAACTGCCCAGTGGAAAAGTGGTTGCTGTGAAGAAACTTCATCGATCAGAAATAGACGAGCCGACATACTTGAGAAGTTTTAAGAATGAGGTGCGGATGTTAGAACAAATACGACATCGAAACATTGTCAAACTTCATGGTTATTGTCTACATAATAGGTACATGTTTCTCATTTATATGTACATGGAAAGGGGAAGCTTGTATTCTATGCTGAGCGATGAGGTTGAGGCTGTTGAATTGGATTGGGTTAAGAGGGTGAATATTTTTAAAAATATGGCCCATGCATTATCCTACATGCATCATGATTGTATCCCACCAATCATTCATCGGGACATATCAAGTAATAACATCCTTTTAGATTCAAAACTTGAGGGTTTCGTATCAGATTTTGGTACAGCGAGATTATTAGACCCCGATTCGTCCAATCAAACCCTTGTTGTTGGCACCTATGGCTACATTGCACCGGAGCTTGCCTGCACAATGGTTGTGACCGAAAAATGTGATGTATATAGCTTTGGGGTGGTGGCACTAGAGACAATGATAGGGAAGCATCCTGGAGAACTTATCACCTCATTATCATCATCGTTATGTCAGGATATAATGTTGAGGGATGTATTAGATTCACGTCTATCACTTCCTGAAGATCTTCAAGTTGCTAAAGATGTAGTTTTTGTGATACTTTTGGCTCTCAAATGCATCCATTCAAATCCGCAATCTCGTCCAACAATGCAACAAGTATCCTACAAACTTCTTAGTAACATACCATTTCCTAAGTCACCATTTTATGCAATTTCCCTCCATGAATTGAAGAATCAAGAAATGTAA 2154 0.4132 MECVVSSVVAVLVVVHTVSMTHAADHSQVVAEADALRNSGWWIWRDPDTSNHCSWSGITCNEAKHVTGIRLRNYQEPIGEVSELNLSSLPSLNFLILSRMGLSGSISDQIGSLTKLTILDLSHNQLTDPIPHQIGSLTKLTHLDLFDNQLTGPIPHQIGSLTKLIHLDLSSNQLTDSLPHQIGTLTELTYLHVSSNELTGPIPSSLGRLTKLTHLDLSYNQLNGSIPHQIGTLIELTYLDLSWGELTGAMPSSLGCLTKLTSLDLSMNQINGSIPPEIGNLKDLVTLDLSNNLISGEIPSNLKILKRLWLLDLSYNRLSGNVPSFITNNCNQTTFDLSQNDDLEGHPGYSICTGGHATSLTLIISLPLTLFFVALILGFAFGLWWKKRQLQPESMPVKKRRGDLFSIWDYDGRIAFEDIILATEDFDIRYCIGVGGYGSVYRAQLPSGKVVAVKKLHRSEIDEPTYLRSFKNEVRMLEQIRHRNIVKLHGYCLHNRYMFLIYMYMERGSLYSMLSDEVEAVELDWVKRVNIFKNMAHALSYMHHDCIPPIIHRDISSNNILLDSKLEGFVSDFGTARLLDPDSSNQTLVVGTYGYIAPELACTMVVTEKCDVYSFGVVALETMIGKHPGELITSLSSSLCQDIMLRDVLDSRLSLPEDLQVAKDVVFVILLALKCIHSNPQSRPTMQQVSYKLLSNIPFPKSPFYAISLHELKNQEM* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1783 717 Gene3D Ribonuclease Inhibitor 177 273 IPR032675 -
Vvi14g1783 717 ProSitePatterns Protein kinases ATP-binding region signature. 432 455 IPR017441 GO:0005524
Vvi14g1783 717 SMART LRR_sd22_2 281 304 - -
Vvi14g1783 717 SMART LRR_sd22_2 113 132 - -
Vvi14g1783 717 SMART LRR_sd22_2 137 163 - -
Vvi14g1783 717 SMART LRR_sd22_2 257 272 - -
Vvi14g1783 717 SMART LRR_sd22_2 209 224 - -
Vvi14g1783 717 FunFam Leucine-rich repeat receptor protein kinase EMS1 155 251 - -
Vvi14g1783 717 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 252 346 - -
Vvi14g1783 717 PRINTS Leucine-rich repeat signature 116 129 - -
Vvi14g1783 717 PRINTS Leucine-rich repeat signature 209 222 - -
Vvi14g1783 717 ProSiteProfiles Protein kinase domain profile. 426 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1783 717 SMART LRR_typ_2 257 281 IPR003591 -
Vvi14g1783 717 SMART LRR_typ_2 305 329 IPR003591 -
Vvi14g1783 717 SMART LRR_typ_2 161 185 IPR003591 -
Vvi14g1783 717 SMART LRR_typ_2 209 233 IPR003591 -
Vvi14g1783 717 SMART LRR_typ_2 113 137 IPR003591 -
Vvi14g1783 717 ProSitePatterns Tyrosine protein kinases specific active-site signature. 550 562 IPR008266 GO:0004672|GO:0006468
Vvi14g1783 717 FunFam Leucine-rich repeat receptor protein kinase MSP1 389 504 - -
Vvi14g1783 717 Gene3D Ribonuclease Inhibitor 26 176 IPR032675 -
Vvi14g1783 717 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 79 154 - -
Vvi14g1783 717 Pfam Leucine rich repeat 187 243 IPR001611 GO:0005515
Vvi14g1783 717 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Vvi14g1783 717 Gene3D Transferase(Phosphotransferase) domain 1 505 698 - -
Vvi14g1783 717 Gene3D Phosphorylase Kinase; domain 1 394 504 - -
Vvi14g1783 717 Gene3D Ribonuclease Inhibitor 274 363 IPR032675 -
Vvi14g1783 717 ProSiteProfiles Leucine-rich repeat profile. 115 137 IPR001611 GO:0005515
Vvi14g1783 717 FunFam MDIS1-interacting receptor like kinase 2 505 698 - -
Vvi14g1783 717 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 85 694 - -
Vvi14g1783 717 Pfam Leucine Rich repeat 258 272 IPR001611 GO:0005515
Vvi14g1783 717 Pfam Leucine Rich repeat 161 176 IPR001611 GO:0005515
Vvi14g1783 717 Pfam Protein kinase domain 431 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1783 717 SUPERFAMILY Protein kinase-like (PK-like) 411 691 IPR011009 -
Vvi14g1783 717 SUPERFAMILY L domain-like 50 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1783 Vvi-Chr14 28813586 28816587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1783 102 598 Receptor kinase-like Gene Family AT4G08850 41.279 2.57e-117 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi14g1783 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1783 - - vvi:104881686 1394.41