Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1765 ATGGGACGCAAGAAGCGAGTCAAGCCTTCTTCTTCTTGTTCTGCCCCTGCGGCGGCCGTGGGTGTCAAGGCAGCTTTCCCGTCCGCTTCCTCACTCTCCCATGGGTCCCCCAATAAGGAAGCAAAGAAAGCAGCAGAAATGGAGGCAATCAAGCTCGATTGCGACCGCGCGTTTGATGCTTTCCGGCGTGGAAACCACCATAAAGCCCTAAAGCTCATGAAAAAGTTTTGTTCGAGCTACCCGAACTCTGGTTTTGTTCATACTCTTCAAGGTACCATGTATTACCAACTCGCTCTTACAATTGCCGATTCTAGTACCAAACTCCAATACCTCAAGACTGCAGCGGACTCTGCCTCGCGAGCCACGCTGCTCTCACCCGAGAAGATGGATTCCGCCCATTTCTTTGCGCATTTGCTCTATTTGACGTCGGAGAAAAATGATGGATACCAAGAAGTTGTGCGAGAGTGTGAAAGGGCGTTGTCAATTCCAGTGGAGAAGGCTAGTTTACTTGTGGGGCGGAATCAATTAGAAGGGTCGATTCTCATGGCACAAATTTCAGAACTTCAAGAGGGCCTGCGGTCACTGATTGGAATGTCAAACGAGACCATGAATAACGGTGTGCATTTGGATTTGGAAGCTAAGTTTATGTTGGTTCCTTTTTCCGATCTTTTGAAAGAGAGTAAGTTGCTTAGTTTAAAATATTCTGAGGATGGTATGGAATTGAAAGATCTTGAGGAAAGAGAGAAGGAGATTGAGGCTAAGATTCAAAAAACAAAGCTTTTGGAGAACTTGCGGGTATTACCAGAATGGCAAACAGAGGAAGCTAGTCTGCAAAATTATCTGAAAGATGGAGTGCCTGAGTCGTCTTCCAGGTCTTCTTACAAACAAGAAAAGATAAAAAGGGTCTCAAATCTTAAAAAGATGAAGGAATCGGCACGTATGATGCCTTATGTTGTGATGTATTGGGACTCGATCAGTTTTGATCAGAAGAGGAGATTGCTCAATGTGAGAATTGGGGATCTAATAGAGTATTTTGGTTCAAACGAGTATGTTGAGGAAGCGCTGATTTTCTGTGAAGCCATGAGTTTTGCAAAGGATAACAAGAGCTGGAAGTTTTTGGGATGTTGTTTTTGCAGTCAGAGATTTAAGGAATTAATACCTTATCTGAAACATCTTGAGGTGCAGCATCTGCGGAATGTTAAGGTTTTAGCACCCGAGATGATGTCAATGTTACCACTAGAACTTAATAGTTATTGGGTTGACATGCTATTGAAGGATAGGTGGAAGCCAGTGGACACTTCTGCAGCTCTGAAAATGATTGAAAGTGGTCCGAAAGGCGAGTTATCTTGTACTGTTGGTGGTGACAGAGAGTCCCATGGAGGGGAGGTTGGTGGTGATCAAAATATCAAGGAAGTTGATGGAGAAAAAGGGTTGCCTGATGCCTTCCCTTTCGACCATAACTGGCCATTATCTTATGATTCTGAGCGTGCAGGGATCCTTTCGAAAATCCATATCATGTTCAAATTGTTTTTTAGACACAACTATCTCTCTGAAAGACTTCTTAAGGTGTTGATTAAGTACTCCTTGGAAAAGCTGCAGACACTTGTTCCAGAATTGGAGCCTTTAATTCAAGGACTGGACCAAACACCTTTGTGCCTCTGCTTTTTGCAAGTTCCTCAGCTCAGATATGTCTATAGTTATTTGGAGGATTTGGTTCGTCTTTGTAGGTTAGATTTTCGTTCAGAGAAGGATGGGTCCGTGGCTGAGACGCCCAGGGGAGGTTTTGACATCAAACACAGGATTGGTCTTTCTAGTGAATCAGTATCTCTCCTTTTGGATAAACACTCGAATAGGGGAGCGGTTGATTTCTTCACTTATCATGACAACATTTCTGCTGATGCTTCTTCAGTAGCTTTTACTGTTGATAATCTTGAAGATGATGCACTTCCAGGCAGTGATTCTTTAGCAGCTTGGATATTCGGGGGTCCTTCAAATGAACAACAATTGACATCATGGGCTCGTGCATTACAAGAGAAAAAACATCAAGCGATAGACATTTTGAGTATCCTCGAGAAGGAATTTCCTGAATATAAAAGCTTGTGTGATAGTAAATGTATTCATTTACGTCAAGAAGAAGCATTTCAGGCAGTCGAGAATATCTTGGCCGAGGAATTCACAAAGAGGAGGGAAAACTTGGAGTTTGTCCCGCAAGGTTATGAGGTCCTCTTGAAGAAGCGGCAAGAAGAGCTTGCTAGGACGTCTAATGATGTGTTTGGCAGTGATGCGGCTGAGTTCACTTTCATATCAAAGGTTCTTAAAGAAGTAGAAGCTCTGAGTCTAAGAGTAGCCGGTGGGACTTCTCATTTATCTGATCAGGAAAGTGATCAAGAAGATGAGAGCAAGACGTTCGAAGACCTGCTTGAGCAGGATAGTTTGTTAGAAATGGCAGTCCAAGATCAGAAAGAAGAGGTGTCTTTGAAGGTAGGTGTCCCAACCTTTTTAATTTTGATATATAATGAAAAATGTCAAATTCTTCCTAAATTTATAAACTACTCCATGAATTGTACTTTCTCTTGTGCAGGATTGCCTGGTGGGAGAACTTCTGAAGACAGTGTTTTGTCTCCTGATCAAAGAGGATCACAATGCACATTCGACGACATGAATGCATCAGATGTACATGGGACTAGTCTGAAAAAAAGTCTTGCTCAATACGATTGCTTCTTAGATGTGATCATAACGCAGTCACTTTGGCATTTGAGATGGTTCCGATTTGAGTTGCAACGAAGAAGAGAAATCCCTCATGCTCATGCTGGAAACCCATGTGTTTTCTGTTCATTATGCAATACTTTTACAGTCTTAAGTCTCTCACCAGTATGTTGGAAAAAAGATGTTGTTGCTCCATGCCTTGCAAAGATGGCTTTGAGTGACTTGTACCCTGATAATATTTTCTTCCAGGAGGCACAAACAAATGATGTTATTTCAATCTTGGTTGGAATTTTTGAATGTCTTCATCAGTCATTTTCTGCGCCAGGAGAAAAATATAGCGGAGAAAATTGGGATTGTACATCGGATGAGTGCTTAGCACATACTATCATTGGAATGAACCTTTTGGAAAGAATAAGCTGTTGCTATTGCGGTCTTGAGTCTGGGAATGAGCAGTTTACTTCATTTCTTCGCATGGATACGTACATGGATAGCTCATTTGACAAGCTTTTGAAGCTTGTAAATGCAAGTAGTCTATTCCCTTGTGATCCAGAGGCAGGAGGCTGTGGGAAACTCAATCCTACTCAGCATTTTCTTTCGAGTCCTCCTCATGTGTTCATAACTGGTATGTGGCAGAATGGTCATGAGCGCGGGGCGGATATATCAACAACATTGGCTGCTTTGTCTACTAAGATAGATCTCGGTATCCTATATGAAGGTTTAGATGAAGGGAACACGCATTACCTCATTTCTTTGGTTTGTTTTACTGGGAAAAATTATCGGTGCTTTGCTTACCGTCACGAGGTTGAAAAATGGATTATGCTTGATGATGAAGAATGTAAGGTCATTGGTTGTTGGAACGATGTTATTACCGTTTGCAGAACAAGGAATTTACAACCTCTGATTCTTTTCTTTGAAGATGAAATGCAGATTTTTTAA 3642 0.4193 MGRKKRVKPSSSCSAPAAAVGVKAAFPSASSLSHGSPNKEAKKAAEMEAIKLDCDRAFDAFRRGNHHKALKLMKKFCSSYPNSGFVHTLQGTMYYQLALTIADSSTKLQYLKTAADSASRATLLSPEKMDSAHFFAHLLYLTSEKNDGYQEVVRECERALSIPVEKASLLVGRNQLEGSILMAQISELQEGLRSLIGMSNETMNNGVHLDLEAKFMLVPFSDLLKESKLLSLKYSEDGMELKDLEEREKEIEAKIQKTKLLENLRVLPEWQTEEASLQNYLKDGVPESSSRSSYKQEKIKRVSNLKKMKESARMMPYVVMYWDSISFDQKRRLLNVRIGDLIEYFGSNEYVEEALIFCEAMSFAKDNKSWKFLGCCFCSQRFKELIPYLKHLEVQHLRNVKVLAPEMMSMLPLELNSYWVDMLLKDRWKPVDTSAALKMIESGPKGELSCTVGGDRESHGGEVGGDQNIKEVDGEKGLPDAFPFDHNWPLSYDSERAGILSKIHIMFKLFFRHNYLSERLLKVLIKYSLEKLQTLVPELEPLIQGLDQTPLCLCFLQVPQLRYVYSYLEDLVRLCRLDFRSEKDGSVAETPRGGFDIKHRIGLSSESVSLLLDKHSNRGAVDFFTYHDNISADASSVAFTVDNLEDDALPGSDSLAAWIFGGPSNEQQLTSWARALQEKKHQAIDILSILEKEFPEYKSLCDSKCIHLRQEEAFQAVENILAEEFTKRRENLEFVPQGYEVLLKKRQEELARTSNDVFGSDAAEFTFISKVLKEVEALSLRVAGGTSHLSDQESDQEDESKTFEDLLEQDSLLEMAVQDQKEEVSLKVGVPTFLILIYNEKCQILPKFINYSMNCTFSCAGLPGGRTSEDSVLSPDQRGSQCTFDDMNASDVHGTSLKKSLAQYDCFLDVIITQSLWHLRWFRFELQRRREIPHAHAGNPCVFCSLCNTFTVLSLSPVCWKKDVVAPCLAKMALSDLYPDNIFFQEAQTNDVISILVGIFECLHQSFSAPGEKYSGENWDCTSDECLAHTIIGMNLLERISCCYCGLESGNEQFTSFLRMDTYMDSSFDKLLKLVNASSLFPCDPEAGGCGKLNPTQHFLSSPPHVFITGMWQNGHERGADISTTLAALSTKIDLGILYEGLDEGNTHYLISLVCFTGKNYRCFAYRHEVEKWIMLDDEECKVIGCWNDVITVCRTRNLQPLILFFEDEMQIF* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1765 1213 Coils Coil 234 264 - -
Vvi14g1765 1213 Pfam Protein of unknown function (DUF627) 57 162 IPR006866 -
Vvi14g1765 1213 Gene3D Cysteine proteinases 902 1209 - -
Vvi14g1765 1213 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 828 - -
Vvi14g1765 1213 Pfam Protein of unknown function (DUF629) 319 815 IPR006865 -
Vvi14g1765 1213 Coils Coil 673 693 - -
Vvi14g1765 1213 SUPERFAMILY Cysteine proteinases 906 1207 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1765 Vvi-Chr14 28679521 28688251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1765 1 828 C2H2 Transcription Factor Family AT3G47910 33.941 1.30e-124 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1765 - - vvi:104881683 1607.81