Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1763 ATGGGGCTCAAGAACCGAGGATCTGGTTCCGGGTCTGGGTCCAAGGCGGCTCCAAAGTCGGTGGCTGAGGGAGCAGCGGCAGCCGCCGGATTGGACAAGGTGATCAAACCGGAGATCGAGCGCGCCCAGTCGGTTTTCCGCCGCGGGAACCACAAGAAAGCCCTGAAGCTCATGCAGGAGTTGTGCAGGCGCCACCAGAGCTCTGCTCTCGCTCACAATGTTCGAGGTGCTATGCTTTTTAACCTAGCTGCTTTAATCGACGATCCTAATATCAAACAGCGGCATCTCAAGAATGCAGTGGAGCCGGCGCGGCGAGCCAGGTTTCTGTCACCTAAGTCGGTTGAGTACGCTCATTTCTACGCCCATTTGCTCTTCGAATTGGCCGACGACAAGGAATCGTATCAGGAGGTGATGCGTGAGTGTCAACGGGCATTGAAGTTCCTGCAAGAGGGTGACCAGTTGGATCAGTTAATGCCTCAATCACGGATGGCAGAACTGCATCAGGAGTTGGAGGCGCTGGTTAAGAAGTCCACAATTAATATGTATTCGACTATGATGATAAAGCTTGGGCTCGGGGACTTGGAGGAGAAATTCAAGTTTAATTCAAAGGAAGAGAAGAAGAAATTGAGGACTAGTACTGAAGGAAGGAGGGAGATTGAAGCCCAGATGGAAGTTGCCAGGGTGCCGCAGAAGACGTTGGAGTCCCTGCCTCTGGAAGAAGGAGAGGAAGAGTTGTCTTCCAGAGCTCTTAGACTTGAACGAAGAAAGAAGTCTGCAAATATCAAGAAGATGGTTTCTTTGGGAGATAGGATTAAACAAGTGAAGAAGTATTGGAACTCCTTGAGTTCCGATACAAGGAGGGGATTGCTTCAAGTGAGAATTAGTGATCTAAGAGCGTATTTTAGCTCGTCTAAGGATGATTTGGCTGCGGCTGTTTTATCGGAAGCTATAGCATTTGCGGAAAATAATAAGACTTGGAAGTTCATGGCATGTTGTGTTTGTGATGAGAAATTCACTGATTTGTCACCCTATGTAGAGCATTTTATGGAAGAGCATGTGGGGAAACTTTCACCAAAAATGCTCAAAGTTATGCCACAAAAAATTGATAGAGATTGGGTTCAGATTATTGAGAAAGGTATATGGAAGCCAGTGGATGCCCTTGCAGTATTTCAAACCAGTGAAGATCGGGTGAAAAGCTGGTCTTCTAGTATCGTTAAGCGACATACAATGATTGACATGGATGACTATCTGGAAATTTGCATTAAAGATCACTGGGAATCCTATTCTACAGAAGAAAAGAAAAAGCAGTTTGATGAAGAGTTCATGGAAGTGGAGATTGGTAATCAAAAGGATGAAGGTGGAAACCATGAGCCTAGGGAGAATGATTGGCCAGGGTGGCCATTATCTGATGATCCTCAACGTGAAAGGACCCTTAAGGGGATCCAGGCCATGTTTCAAATACTTCTTAGACAGAGACATCTGGCTACAAGACATATTGTCCAGGTGATGCAATACACCATGGACGAGCTGCAGATTTTTGCTTCAGTGTCCCAACTTCTAAATCATGGCCTGGACCACACACTTCTGTGCATCTGTTTTTTGGGAGTCTCTCAGCTTGAAAAGGTCCTTAGATTTTTGCAGTCTGTTGCTTATATTTGCGGTGTGACCAAGTGCTCTGAAAAGGGTAGCTCCAAAGATAAGGTGTTTGTTGGAGCACAGGGGTCTGAAATCAAAGAAAGAATTGTTTTTTCTAGTGACTCATCATGTCTGCTTTTGGATAAACGCTTACTCAGAGGGGAGCTTAATCTCAGCACATATAATGATGCCATTGCAGATGATGGTTCTGCAGCAACTTCAGCTATTGATGATCATGAAAATGATGTGCTTCCAGATGGTGATTCCTTAGTGCCTTGGTTATTTTCGGGTTGTTCCATTGGGGAACAATTGGCATCATGGGCATGTCTAAGGGAAGATAAGAAACATCAAGGAATGAAAATATTCCACATCCTTCAGAAGGAACTTTCCCACTTAGAAGGTTTGTGTCAGAAAAAGAGCATGCATTCAATCTATGAAGATGCACTCCAGGCAATTGAGCGTGTGTGTCTTGAGGAATCCAAGAGGAGGGCCCAAGATCCTGAGTATCTCCCACAATATTATGAGTACCTCCTGGAGCAGCTGCGAAGAGAGGTTAAGGTGGATGATGGTGATATGCTTCTAAGCCATAAGTGTGAGTTAGATCTCATATCAAATATCCTTAAAGAGGTACACACTATGAGCGTTAATCTGCTCAGTTGTGAGGCTTCTCCTTCACCTGATCAGGAACACCTGCAGAAATCAGACACAGTTGTAGAGGAAACAATCCGAAGATATGAAGTTCAGGTCACTCTGGAGCTTTGCAGAATTGATGCAAGGATTATGCGGGTTGTTGCTGCTATGCGACAGCAGGACTTGAAGCTTGGGGCAGCATCTGCTCTTGACTATCGATCAATTATGGTGATCCTTTTAAAGTCGTTTGTGCGGGCACGCTTGGAGGATCTGGTTGACAAAGATGCTATAAAGAAGTCTGATGTTGCAAGAGAAGCATTGTTAGCACAGCTTGCCCTTGACAGCGAGAAGAATATAAGCAGAGGAGGTTATAATACAAAACAGATGCAGAGAAAATCAAAGGATAAGAAAAAGAACAAATCTTATAGAAAAGCCAAGGATCTAAAGGCTAGTAGTGGTAATGAGCAGCTTCTGCTACATGAGGAGGATGCAAAACAAGCTTACTTTCCTGATGCATTTGATGATCAAAATCCAAACTCCAAGATTGGTATTCCTGTAAGTGCTGCTGAAATAAAACAACCAGAAGAGGAACTAAGGCTTCAACTAGAGCTTGAAGCAGAGGAAAGAAAGCTCAAAGAAATTTTGGAGTTTCAACTGCAAATTGAGAATGAATCTAAACAAAAGCACCTTGCTGAGCAAAATAAGGTGGGTGGGATGATAGAGCGGCAGATTTCTGGTGAGACAGCCAAGAGGTCATCAGCAGAAGAAGCCCCAAAACTTAGTGCCACGATTTTCATTGGCACAATTCCATTAGTGGCCCCACAATTTACAGAGAAGTTGGCAGAGGAAACGCCTGTTTGA 3126 0.4447 MGLKNRGSGSGSGSKAAPKSVAEGAAAAAGLDKVIKPEIERAQSVFRRGNHKKALKLMQELCRRHQSSALAHNVRGAMLFNLAALIDDPNIKQRHLKNAVEPARRARFLSPKSVEYAHFYAHLLFELADDKESYQEVMRECQRALKFLQEGDQLDQLMPQSRMAELHQELEALVKKSTINMYSTMMIKLGLGDLEEKFKFNSKEEKKKLRTSTEGRREIEAQMEVARVPQKTLESLPLEEGEEELSSRALRLERRKKSANIKKMVSLGDRIKQVKKYWNSLSSDTRRGLLQVRISDLRAYFSSSKDDLAAAVLSEAIAFAENNKTWKFMACCVCDEKFTDLSPYVEHFMEEHVGKLSPKMLKVMPQKIDRDWVQIIEKGIWKPVDALAVFQTSEDRVKSWSSSIVKRHTMIDMDDYLEICIKDHWESYSTEEKKKQFDEEFMEVEIGNQKDEGGNHEPRENDWPGWPLSDDPQRERTLKGIQAMFQILLRQRHLATRHIVQVMQYTMDELQIFASVSQLLNHGLDHTLLCICFLGVSQLEKVLRFLQSVAYICGVTKCSEKGSSKDKVFVGAQGSEIKERIVFSSDSSCLLLDKRLLRGELNLSTYNDAIADDGSAATSAIDDHENDVLPDGDSLVPWLFSGCSIGEQLASWACLREDKKHQGMKIFHILQKELSHLEGLCQKKSMHSIYEDALQAIERVCLEESKRRAQDPEYLPQYYEYLLEQLRREVKVDDGDMLLSHKCELDLISNILKEVHTMSVNLLSCEASPSPDQEHLQKSDTVVEETIRRYEVQVTLELCRIDARIMRVVAAMRQQDLKLGAASALDYRSIMVILLKSFVRARLEDLVDKDAIKKSDVAREALLAQLALDSEKNISRGGYNTKQMQRKSKDKKKNKSYRKAKDLKASSGNEQLLLHEEDAKQAYFPDAFDDQNPNSKIGIPVSAAEIKQPEEELRLQLELEAEERKLKEILEFQLQIENESKQKHLAEQNKVGGMIERQISGETAKRSSAEEAPKLSATIFIGTIPLVAPQFTEKLAEETPV* 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1763 1041 SUPERFAMILY TPR-like 41 155 IPR011990 GO:0005515
Vvi14g1763 1041 Pfam Protein of unknown function (DUF629) 273 777 IPR006865 -
Vvi14g1763 1041 PANTHER CARBOXYL-TERMINAL HYDROLASE-LIKE PROTEIN, PUTATIVE (DUF627 AND DUF629)-RELATED 1 994 - -
Vvi14g1763 1041 Coils Coil 242 262 - -
Vvi14g1763 1041 Gene3D Tetratricopeptide repeat domain 37 220 IPR011990 GO:0005515
Vvi14g1763 1041 MobiDBLite consensus disorder prediction 875 911 - -
Vvi14g1763 1041 Pfam Protein of unknown function (DUF627) 41 148 IPR006866 -
Vvi14g1763 1041 ProSitePatterns Zinc finger C2H2 type domain signature. 331 352 IPR013087 -
Vvi14g1763 1041 MobiDBLite consensus disorder prediction 447 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1763 Vvi-Chr14 28672160 28676096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1763 27 990 C2H2 Transcription Factor Family AT3G47890 37.988 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1763 - - vvi:104881688 1875.52