Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g1762 | ATGGGTTGGAAGAAGCGAGGCGGTGGTTTGCGCTCTAAGAATCTCCCCACTCCTTCTCCGGCGGCAGACAAGGCGGTGGAGGAGGAAAAAACGGAAGCGCATATCACTTCCGAGATCGCGAGGGCCGAAAAGACGTCCGAAAGAGGGAACCACAGGAGAGCCCTTATGATCATGAAAGAGTTGAGCTCGCGCAACCCGAGCTCAGCCCAGGTTCACTTTTCTCACGCTGGTTTAATTTGTACACAAGCTAAGTCGATGAAAGATCCTACCGCCAAAAAGCGGTATTTAAAGAACGCGTTGGAGCCCGTGCAGCGAGCCATGTCACTGGACCCGGACGAGTTAAAGTACTTTTGTTTCTATCCGTCGTTGATCTTTGACTTGGCCAGCCATGCAGATGCGTACAGAGAGGTGATGCAGGTGGTTGGACGGACGAGGCAGCGTTTGCAAGAACGTGGCCTAGTCCGTGGGATTCTGGATAAGCACATGGAGGCCCTGTTTCTCTGTTCGAGGTATATAGTGTGGCAGCTAGAGCAGAAGAATGTGAATTTTGATGATGAGCAATTTAAGCACAAATATATGGCTAATGCCATGAGAAAAATGAAGCAGATTAAAGCCAAATCGGAAGCAGTTAGGGTGACCCAGAAGACATTGCAATCCATGGACTTCCAAGAAGACTTCCAAGAAGAGGAAGAGATGACTTTGGGAGCTCGTATACTAGAACGAAGAAAGACTCTTACAAATATCAAGAAGCTCACTGCTTTGGGAGATAAGATCACTCAAGTTCAGGGGTACTGGAACTCCTTAAGTGCTGATACGCAGAGGGGATTTCTTAAAGTAAGGATATGTGATCTAAAAGAGCATTTTATTAGGTTCGCCAACAATGATCTGGCGGTGGCAGTTCTGTCGGAAGCTATAGGTTTCTTGCAGGAGAATGATTCTTGGAAGTTCATGGAGTGTTGTGTTTGTGCTGAGAAATTTACTGATCTGTTGTTGTATGCGGAGCATTTTGCTGAGCATATGGGGGGTCTTTCAGAGAGGTTGAGCTTATTTCAGCCACAAGAAATTGATAGTGATTGGGTTGACATTATTGAGAAAGGTGGATGGAAGCCAGAGGATGCCCGTGCCGTATTGCAAATTAGTGAAGATGAGTTGAAACGCAAGTCGTCTAGTCATGTTGAGTGTACAGTGATGGACATGGATGTCCATCTGCAAAATTGCATTAAAGATCCTCGTGAATCCTATTCTGTAGAAGAAATGAAGAAACAATTTGATGAAATGTTGATGGAAGCAGAGATTGGTAATCAAAATGATGAAAAAAGTGGAAACCATGAACCTGAGGGGAGTGAGTGGCCATTACCTGATTACCCTCGTCGTGCAAAAACGCTTGCAAAAATCCAGGGCATGTTACAAATGCTTCTGAAAGGCAGATACCTTTCAAGAACGCATGTTCTCCAGGTGATACGGTACACCCTGGAGGAGCTGCAGATATTTGCTTCAGAATTGCAGCTTAGGAATCTTGGCTTGGACAACACACTTCTGGGAATCTGCCTTTTGGAATTTCCTCAACTTGAAAAAGTCCTAAGATTTTTGCACTCAATAGCCTATATTTGTGGTATAACCAAATTTCCTGAAGAGGGTGGGGCACCTGCTGGAGCTCAGAAGTCTGAAATCAAAGAAACAATTGGTGTTTCTATAGACTCATCATATCTCCTTTTGGATGAACGCTTAGTGACAGGAGAGCTTGATGTCAGCACATCTAACAATTCCAATTCAAATGAGGGCTCTGGATCAACTTTTTCCCTTGAGGATCATGACGATGATACACTGCCAGGTGGTGGTATTTTTGTGCCATGGTTATTTGTGGGTCGTTCCATTGAGGAAAAATTGGAATCATGGGCATGTCTATTAGATGATAGAAAACATAAAAAAATTGAAGTCCATGTTCTTTTCCAGGCACACTTGGAGGATCTGACTGACAAAGATGCCACAGAGAAGGCCTTAGCTGCAGAAGAAGCATTGTTAGCAGACCTTGCCCTTGATGCCGAGAAGAGTGTAGACAGAGGAGATGGTAAAGAAAAACAGACAGAGAAAAAATCAAAGAACAAGAAAAAGAACAAATATTATAGAAAATCTGAGGATCTAAAGCAAAATAAGTTGGGGGAGAGGATAGAGCAGCACTCTTCTGATGAGACAGCCATTGGTACAATTTCACCAGGAGGCTTACAAAAGCAAGAGAGTTCATCAGCAGCTGAACAGAAGACTACTTCGACTGATGAAGTTCCACTAATTCTCCCTCTATTATATGAGAAGCTGGGAGAGGGAAAGTTTGTTTCCTCAAAAGGTAGTGATGATGGTTCAAATGAGGCTAATTATGAGACATATCACAATTTTGCTGAGTCAAGTGAAGGGGTGCCTCAAGGTGGAGCTGGTCTGGAAAATTATGCTAACGATTGCTCCCTGAATGCAATCATACAGTCACTTTGGCATTTGAGATGGTTTAGACGTGAGTTGATGAAATCCGCAGCACATTTGCATATGATAGATGAAGCCTGTGTTTACTGTTCCTTAAATTCGATTTTTTCTTTGTTAAATTCGGCATCCATATCTAGCCATAAAAAGGCGATTAGTCCAGGCCCTTTAAGAGATGCTCTCAGTAATTTGGACCCTCAAAGTAATCTTTACAAGAAGGGAGAAATGAATGATGCTTCAGAAATCTTGCATAAAATTCTTGAAGGTCTTCATCTATCATTCAGTACAAAGAAAGAAGAAAGCAATGGTTGGGAGTCTTGGGACCACTTAGATTGCCCAAGCGACATTTGTATAACACATTCTCTATTTGGAATTAAAATTCGGGAAAGAGTTGCATGCTACCATTGCGGTTGTGAGTCTAGGCAACATGGGTATAATTCCCTTTTTCACCTCATAAATGCAAGTGAACTTAGAAAAAAGAAGATTACCCACATGGATAGCTCTTTCGACAACCTTTTGAAGCTTGTGAAGATGGATGATCAAGTTACTTGCAATCCAGAGGAAGGAGGCTGTGGAAAACTCAATTCCATTGATCAAATCCTTTCAGATCCTCCTCATCTGTTTGTAGTTCTCCTTGGGTGGCAGAGTGTCTCTGAGAATTCAGAAGATGTATCAACAACATTGGCAGCTCTGACAACTGAGATAGATATTGCAGTCATCTATGGAGATTTAGATGAGGGGAGAAAGTATCACCTTATTTCTATGGTAAACTTGAACAATTGCTTCAATTCTGAGCTGCCATGA | 3273 | 0.4274 | MGWKKRGGGLRSKNLPTPSPAADKAVEEEKTEAHITSEIARAEKTSERGNHRRALMIMKELSSRNPSSAQVHFSHAGLICTQAKSMKDPTAKKRYLKNALEPVQRAMSLDPDELKYFCFYPSLIFDLASHADAYREVMQVVGRTRQRLQERGLVRGILDKHMEALFLCSRYIVWQLEQKNVNFDDEQFKHKYMANAMRKMKQIKAKSEAVRVTQKTLQSMDFQEDFQEEEEMTLGARILERRKTLTNIKKLTALGDKITQVQGYWNSLSADTQRGFLKVRICDLKEHFIRFANNDLAVAVLSEAIGFLQENDSWKFMECCVCAEKFTDLLLYAEHFAEHMGGLSERLSLFQPQEIDSDWVDIIEKGGWKPEDARAVLQISEDELKRKSSSHVECTVMDMDVHLQNCIKDPRESYSVEEMKKQFDEMLMEAEIGNQNDEKSGNHEPEGSEWPLPDYPRRAKTLAKIQGMLQMLLKGRYLSRTHVLQVIRYTLEELQIFASELQLRNLGLDNTLLGICLLEFPQLEKVLRFLHSIAYICGITKFPEEGGAPAGAQKSEIKETIGVSIDSSYLLLDERLVTGELDVSTSNNSNSNEGSGSTFSLEDHDDDTLPGGGIFVPWLFVGRSIEEKLESWACLLDDRKHKKIEVHVLFQAHLEDLTDKDATEKALAAEEALLADLALDAEKSVDRGDGKEKQTEKKSKNKKKNKYYRKSEDLKQNKLGERIEQHSSDETAIGTISPGGLQKQESSSAAEQKTTSTDEVPLILPLLYEKLGEGKFVSSKGSDDGSNEANYETYHNFAESSEGVPQGGAGLENYANDCSLNAIIQSLWHLRWFRRELMKSAAHLHMIDEACVYCSLNSIFSLLNSASISSHKKAISPGPLRDALSNLDPQSNLYKKGEMNDASEILHKILEGLHLSFSTKKEESNGWESWDHLDCPSDICITHSLFGIKIRERVACYHCGCESRQHGYNSLFHLINASELRKKKITHMDSSFDNLLKLVKMDDQVTCNPEEGGCGKLNSIDQILSDPPHLFVVLLGWQSVSENSEDVSTTLAALTTEIDIAVIYGDLDEGRKYHLISMVNLNNCFNSELP* | 1091 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g1762 | 1090 | MobiDBLite | consensus disorder prediction | 706 | 728 | - | - | |
Vvi14g1762 | 1090 | Pfam | Ubiquitin carboxyl-terminal hydrolase | 810 | 1080 | IPR001394 | GO:0004843|GO:0016579 | |
Vvi14g1762 | 1090 | MobiDBLite | consensus disorder prediction | 436 | 453 | - | - | |
Vvi14g1762 | 1090 | ProSiteProfiles | Ubiquitin specific protease (USP) domain profile. | 809 | 1090 | IPR028889 | - | |
Vvi14g1762 | 1090 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 319 | 339 | IPR013087 | - | |
Vvi14g1762 | 1090 | Pfam | Protein of unknown function (DUF629) | 260 | 697 | IPR006865 | - | |
Vvi14g1762 | 1090 | MobiDBLite | consensus disorder prediction | 729 | 757 | - | - | |
Vvi14g1762 | 1090 | Pfam | Protein of unknown function (DUF627) | 41 | 149 | IPR006866 | - | |
Vvi14g1762 | 1090 | PANTHER | UBIQUITIN SPECIFIC PROTEINASE | 649 | 1080 | - | - | |
Vvi14g1762 | 1090 | MobiDBLite | consensus disorder prediction | 583 | 598 | - | - | |
Vvi14g1762 | 1090 | Gene3D | Cysteine proteinases | 788 | 1083 | - | - | |
Vvi14g1762 | 1090 | SUPERFAMILY | Cysteine proteinases | 807 | 1080 | IPR038765 | - | |
Vvi14g1762 | 1090 | MobiDBLite | consensus disorder prediction | 684 | 757 | - | - | |
Vvi14g1762 | 1090 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Vvi14g1762 | 1090 | MobiDBLite | consensus disorder prediction | 434 | 453 | - | - | |
Vvi14g1762 | 1090 | MobiDBLite | consensus disorder prediction | 583 | 603 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi14g1762 | Vvi-Chr14 | 28664569 | 28670390 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi14g1762 | 33 | 680 | C2H2 Transcription Factor Family | AT3G47890 | 26.367 | 2.62e-65 | 240 |