Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g1745 | ATGGGTGGGAGGAAGAAGAGCAATGGCTCTGTACGGTCCATTTTCATGCATGCCGACGCTGCAGATTTGTGGTTGATGGCTTTCGGGTTCCTCGGAGCTCTGGGTGATGGGTTTTCCATGCCGGTGGTTTTGTATGTGACCAGCGAGATTATGAATAATATCGGCAGTTCCTCAACTTCTGCTGCTGATGCCTTCGTTGATAAAATCAACAAGAATGCAGTGACTTTGCTGTACATTGCTTGTGGGTCATGGGTTGCTTGTTTCCTAGAGGGTTATTGCTGGTCAAGAACAGCAGAGAGACAAGCCACAAGGATGAGGGCTAGATATCTGAAAGCAGTGCTGAGGCAGGACGTGGGCTATTTCGATTTGCATGTGACCAGCACAGCAGAGGTCATCACCAGCGTCTCCAACGATAGTCTCGTGATTCAAGATGTTCTTAGCGAAAAGGTCCCAAACTTCTTGATGAACGCTGCGACTTTCTTAGGAAGCTACATAGCGGCCTTCGCTATGCTGTGGAGGCTAGCTATTGTGGGCTTTCCCTTTGTCGTTGTTCTTGTGATTCCTGGGTTGATGTACGGACGGACACTGATGGGCCTGGCGAGGACGATCAGGGAAGAGTACAATAAGGCTGGTACCATAGCAGAGCAGGCCATCTCTTCCATCAGAACCGTTTACTCCTTTGTTGGAGAGAGCAAAACCCGGTCTGATTTCTCTGCAGCTCTCCAAGGCTCTGTGAAATTGGGTCTGCGCCAGGGTTTGGCCAAGGGCTTGGCCATTGGCAGCAACGGTATCGTTTTTGCCATATGGTCTTTCATGAGTTGGTACGGTAGCAGAATGGTCATGTATCACGGAGCTCGTGGAGGAACTGTTTTCGTCGTAGGGGCTGCCATCGCTGTCGGTGGACTATCACTGGGTGCCGGATTATCCAACCTGAAGTACTTCTCGGAAGCATGCTCAGCCGGAGAGCGAATAATGGAGATGATAAAAAGAGTCCCAAAGATCGATTCAGACAACATGGAGGGCCAAATCCTAGAAAACGTATCTGGGGAAGTGGAATTCAGACACGTAGAATTCGCGTACCCATCACGGCCGGAGAGCATAATTTTTAAAGACTTCAATCTGAAGATCCCGGCGGGGAAAACAGTGGCATTGGTCGGAGGCAGCGGGTCCGGAAAGTCCACAGCGATATCTCTGTTGCAGAGGTTTTATGACCCACTTGGTGGGGAGATTCTTCTTGATGGGGTGGCCATTGATAAGCTACAGCTCAAGTGGGTGAGGTCACAGATGGGCTTAGTGAGCCAAGAACCAGCACTTTTTGCAACCACCATTAAAGAGAACATACTTTTCGGAAAAGAGGACGCTGTAATGGAGGAGGTAGTTGCTGCTGCCAAAGCTTCTAATGCTCATAATTTCATTTGTCAGTTGCCTCAAGGGTATGATACCCAGGTGGGGGAGAGAGGAGTTCAAATGTCTGGAGGCCAAAAACAGAGAATCGCCATTGCACGCGCCATCATCAAAGCCCCACAAATCCTCCTCCTCGACGAGGCAACCAGCGCGTTAGACTCCGAGTCGGAGCGAGTCGTCCAAGAAGCCCTAGACAATGCGGCCGTTGGCCGCACCACCATCATCATCGCCCACCGCCTCTCCACCATCCGCAACGCGGACATCATCACTGTCGTCCAGAATGGCCAGATCATGGAGACCGGCTCTCACGACGACCTCATCCAGAACGACGACGGACTCTACACTTCCCTCGTCCGCCTCCAGCAAACCGAGAAGTCGGAGGCCCCTTCACTCCCGATCTCCTCAACCGCCGCGATCTCAACCAGCATGGATCTCCACAGCACCAGCAGCCGCAGGCTCTCTCTTGTCAGCCGCTCGAGTTCCGCCAACTCAAACGCACCAAGCCGGCCCGCCGGAGAAGTATTCACTGCGGCGGAGCAAGACTTTCCGGTGCCGTCTTTCCGGAGACTGCTGGCAATGAACCTTCCTGAGTGGAAGCAAGCTAGCATGGGATGTTTGAGTGCAGTCTTGTTTGGTGCCGTTCAACCAGTGTATGCATTCGCAATGGGATCGATGATATCGGTTTATTTCTTCCCTGAACATGATGAAATCAAAAAAAAAACCAGAACATATGCGCTTTGTTTTGTTGGATTGGCTGTGTTCTCCTTCCTGGTAAATATCAGCCAACATTACAATTTTGCAGCCATGGGAGAGTACCTGACCAAGCGGGTGAGAGAGAGGATGTTTTCAAAGATTCTGACTTTTGAAGTAGGGTGGTTTGACCAAGACCAGAACTCCACTGGTGCCATTTGCTCTAGGCTCGCCAAAGATGCCAATGTGGTGAGATCATTAGTGGGTGATCGAATGGCGCTTCTTGTCCAAACCTTCTCAGCTGTGATCATCGCCTGCACAATGGGTCTGGTCATTGCGTGGAGACTTGCTGTGGTGATGATAGCGGTTCAACCGCTGATTATAGTCTGCTACTACACAAGACGGGTGCTTCTCAAAAGCATGTCCGCTAAGGGTATCAAGGCCCAAGAAGAAAGCAGCAAGCTTGCCGCTGAAGCAGTCTCTAATCTCCGAATCATCACAGCCTTTTCATCCCAAGCCCGAATCCTGAAAATGCTTGAGGCCGCACAGGAAGGTCCCCTACGGGAAAGTATCCGTCAATCATGGTTCGCTGGGATCGGACTCGGAACCTCCCAAAGCCTCATGACATGTACTTGGGCTCTGGATTTTTGGTATGGGGGTAAGTTAATCTCACAAGGCTATATTTCATCAAAAGCATTGTTTGAGACATTCATGATCTTAGTAAGCACCGGCCGTGTCATTGCCGATGCCGGAAGCATGACCAGTGATCTCGCCAAAGGGTCGGACGCGGTTGGTTCGGTTTTCGCAGTCCTTGACCGCTACACACGAATAGAACCCGAAGATCCCGATGGTCACCAACCCGAAAAAATAATTGGTCGAGTTGAAATTCGTGATGTGGACTTTGCTTACCCGGCTAGACCTGATGTACTTGTGTTTAAAAGCTTCTCAATCAATATAGACGCCGGAAAATCAACGGCACTTGTAGGACAGAGTGGGTCTGGCAAGTCAACTATCATTGGATTAATAGAAAGATTCTACGACCCACTCCAAGGAAGCGTCAAAATCGACGGTAAAGATATAAGGTCCTATCACCTTAGAGTACTAAGGAAACACATCGCACTAGTGAGTCAAGAGCCCACACTGTTCGCAGGCACCATAAGAGAAAACATTGCTTACGGCGCATCTGATAAAATCGACGAATCAGAAATCATCGAAGCCGCAAGGGCAGCCAACGCTCACGATTTCATTGCGGGACTAAAAAATGGCTATGATACGTGGTGTGGTGACAGAGGAGTACAACTCTCCGGTGGGCAGAAGCAGCGTGTCGCTATAGCCCGCGCCATACTAAAAAACCCGGCGGTGCTGTTGCTTGACGAAGCTACGAGCGCACTGGATAGCCAATCAGAGAAGGTGGTGCAGGATGCTCTGGAGCGCGTGATGGTGGGGCGGACGAGTGTGGTGGTGGCCCACAGGCTGAGTACCATACAGAATTGTGATCTCATAGCGGTTTTGGATAAAGGAAAAGTGGTGGAGAAAGGGACCCACTCATCCTTGTTAGGAAAAGGCCCCAGTGGTGCGTACTACTCGCTAGTGAACCTCCAAAGGAGGCCCAACACCTCCAACATGGTCAACTAG | 3729 | 0.506 | MGGRKKSNGSVRSIFMHADAADLWLMAFGFLGALGDGFSMPVVLYVTSEIMNNIGSSSTSAADAFVDKINKNAVTLLYIACGSWVACFLEGYCWSRTAERQATRMRARYLKAVLRQDVGYFDLHVTSTAEVITSVSNDSLVIQDVLSEKVPNFLMNAATFLGSYIAAFAMLWRLAIVGFPFVVVLVIPGLMYGRTLMGLARTIREEYNKAGTIAEQAISSIRTVYSFVGESKTRSDFSAALQGSVKLGLRQGLAKGLAIGSNGIVFAIWSFMSWYGSRMVMYHGARGGTVFVVGAAIAVGGLSLGAGLSNLKYFSEACSAGERIMEMIKRVPKIDSDNMEGQILENVSGEVEFRHVEFAYPSRPESIIFKDFNLKIPAGKTVALVGGSGSGKSTAISLLQRFYDPLGGEILLDGVAIDKLQLKWVRSQMGLVSQEPALFATTIKENILFGKEDAVMEEVVAAAKASNAHNFICQLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKAPQILLLDEATSALDSESERVVQEALDNAAVGRTTIIIAHRLSTIRNADIITVVQNGQIMETGSHDDLIQNDDGLYTSLVRLQQTEKSEAPSLPISSTAAISTSMDLHSTSSRRLSLVSRSSSANSNAPSRPAGEVFTAAEQDFPVPSFRRLLAMNLPEWKQASMGCLSAVLFGAVQPVYAFAMGSMISVYFFPEHDEIKKKTRTYALCFVGLAVFSFLVNISQHYNFAAMGEYLTKRVRERMFSKILTFEVGWFDQDQNSTGAICSRLAKDANVVRSLVGDRMALLVQTFSAVIIACTMGLVIAWRLAVVMIAVQPLIIVCYYTRRVLLKSMSAKGIKAQEESSKLAAEAVSNLRIITAFSSQARILKMLEAAQEGPLRESIRQSWFAGIGLGTSQSLMTCTWALDFWYGGKLISQGYISSKALFETFMILVSTGRVIADAGSMTSDLAKGSDAVGSVFAVLDRYTRIEPEDPDGHQPEKIIGRVEIRDVDFAYPARPDVLVFKSFSINIDAGKSTALVGQSGSGKSTIIGLIERFYDPLQGSVKIDGKDIRSYHLRVLRKHIALVSQEPTLFAGTIRENIAYGASDKIDESEIIEAARAANAHDFIAGLKNGYDTWCGDRGVQLSGGQKQRVAIARAILKNPAVLLLDEATSALDSQSEKVVQDALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGKVVEKGTHSSLLGKGPSGAYYSLVNLQRRPNTSNMVN* | 1243 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g1745 | 1242 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 982 | 1232 | IPR027417 | - | |
Vvi14g1745 | 1242 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 27 | 316 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vvi14g1745 | 1242 | SMART | AAA_5 | 378 | 564 | IPR003593 | GO:0016887 | |
Vvi14g1745 | 1242 | SMART | AAA_5 | 1019 | 1212 | IPR003593 | GO:0016887 | |
Vvi14g1745 | 1242 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 659 | 975 | - | - | |
Vvi14g1745 | 1242 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 343 | 589 | IPR027417 | - | |
Vvi14g1745 | 1242 | ProSitePatterns | ABC transporters family signature. | 490 | 504 | IPR017871 | GO:0005524|GO:0016887 | |
Vvi14g1745 | 1242 | Gene3D | - | 341 | 590 | IPR027417 | - | |
Vvi14g1745 | 1242 | Gene3D | ABC transporter type 1, transmembrane domain | 14 | 960 | IPR036640 | GO:0005524|GO:0016020 | |
Vvi14g1745 | 1242 | CDD | ABC_MTABC3_MDL1_MDL2 | 351 | 589 | - | - | |
Vvi14g1745 | 1242 | ProSitePatterns | ABC transporters family signature. | 1132 | 1146 | IPR017871 | GO:0005524|GO:0016887 | |
Vvi14g1745 | 1242 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 351 | 587 | IPR003439 | GO:0005524 | |
Vvi14g1745 | 1242 | FunFam | ABC transporter B family member 4 | 341 | 595 | - | - | |
Vvi14g1745 | 1242 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 672 | 957 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vvi14g1745 | 1242 | Pfam | ABC transporter | 1011 | 1160 | IPR003439 | GO:0005524 | |
Vvi14g1745 | 1242 | FunFam | Putative ABC transporter B family member 8 | 639 | 980 | - | - | |
Vvi14g1745 | 1242 | Pfam | ABC transporter transmembrane region | 671 | 939 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vvi14g1745 | 1242 | Pfam | ABC transporter transmembrane region | 27 | 292 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vvi14g1745 | 1242 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 992 | 1229 | IPR003439 | GO:0005524 | |
Vvi14g1745 | 1242 | Pfam | ABC transporter | 370 | 518 | IPR003439 | GO:0005524 | |
Vvi14g1745 | 1242 | FunFam | ABC transporter B family member 1 | 13 | 350 | - | - | |
Vvi14g1745 | 1242 | Gene3D | - | 982 | 1240 | IPR027417 | - | |
Vvi14g1745 | 1242 | SUPERFAMILY | ABC transporter transmembrane region | 653 | 971 | IPR036640 | GO:0005524|GO:0016020 | |
Vvi14g1745 | 1242 | PANTHER | ABC TRANSPORTER B FAMILY | 4 | 721 | IPR039421 | - | |
Vvi14g1745 | 1242 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 26 | 324 | - | - | |
Vvi14g1745 | 1242 | SUPERFAMILY | ABC transporter transmembrane region | 22 | 335 | IPR036640 | GO:0005524|GO:0016020 | |
Vvi14g1745 | 1242 | FunFam | ABC transporter B family member 4 | 982 | 1238 | - | - | |
Vvi14g1745 | 1242 | CDD | ABC_MTABC3_MDL1_MDL2 | 992 | 1232 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi14g1745 | Vvi-Chr14 | 28532844 | 28538365 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi14g1745 | 671 | 1242 | Calmodulin-binding Proteins | AT2G36910 | 36.585 | 2.54e-114 | 385 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g1745 | K05658 | - | vvi:100854950 | 2298.09 |