Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1736 ATGAAACTTTCAGAGGATCTAAGAGGCCATATCCAAGGGTGTAGCTTGGTTCTGTTAACCATAGTAATATTGTGTTGTGTTGCTCTGTTCTCAGCAGCAGTTGCCGAAGACGATGTCAAGTGTTTGCGGGGTGTGAAGGAATCTCTCAGCGACCCTCAAGGTAAGCTCAGCTCATGGTCTTTTTCAAACATTTCAGTAGGGTCTTTATGCAAATTTGTGGGGGTTGCATGCTGGAATGACCGTGAGAATCGTATATTCGGCCTCGAACTACCTGACATGAAACTATCTGGGGAGATCCCTAAACCCTTGGAGTACTGTCAGAGTATGCAAACTTTGGATCTATCAGGTAACCGTCTCTATGGTAACATCCCTTCTCAAATTTGTACATGGCTACCTTATTTAGTAACCCTGGATCTGTCTAATAATGATCTTTCCGGCACGATCCCACCCGACCTTGCAAATTGCTCTTTCTTGAATAGTCTTTTACTGGCGGATAATCAATTGTCTGGTATAATTCCGTCCCAATTATCAAGTTTGGGTCGCCTGAAGAAGTTTTCTGTGGCAAATAATCGTCTCACTGGTACAATTCCTTCAGCTTTTGGGAAATTTGATAAGGCGGGTTTTGATGGGAACAGTGGACTTTGTGGTAGGCCTCTTGGATCCAAGTGTGGGGGGTTGAATAAGAAGAGTCTTGCAATCATAATTGCAGCTGGGGTTTTTGGTGCAGCCGCGTCCTTGTTGTTAGGATTCGGGTTATGGTGGTGGTTCTTTGCAAGGCTGAGGGGGCAGAGAAAGAGGAGATATGGAATTGGAAGAGATGATCATAGCAGCTGGACTGAGAGGTTGAGGGCTCACAAGCTTGTTCAAGTCACATTATTTCAGAAACCGATTGTTAAAGTCAAGTTAGCGGATTTGATGGCAGCTACCAACAATTTCCACCCTGAGAATATCATTAACTCAACCAGGACAGGGACTAGTTACAAGGCAATTCTTCCTGATGGATCTGCACTGGCAATCAAGAGGCTCAACACCTGCAATCTGGGTGAGAAGCAGTTTCGATCCGAGATGAATCGATTAGGGCAGTTCAGGCACCCGAATTTGGCACCCCTTTTGGGATTTTGTGCTGTGGAAGAAGAGAAGCTTTTGGTTTATAAGTACATGTCTAACGGGACTCTGTATTCTCTGTTGCATGGAAATGGTACCCCAATGGATTGGGCAACTAGATTCAGGATTGGTTTGGGGGCTGCCAGAGGTCTTGCTTGGCTTCACCATGGCTGCCAACCACCACTCCTGCATGAAAACATAAGCTCGAATGTGATTCTCATTGATGATGACTTTGATGCTAGGATAGTGGATTTTGGATTGGCCAGGCTCATGGCAACTTCTGACTCCAATGGGAGTAGTTTTGTCAATGGAGGATTGGGAGAATTTGGTTATGTTGCTCCAGAGTACTCGAGCACAATGGTTGCTTCACTGAAAGGAGATGTATATGGATTTGGGGTTGTGCTTCTGGAATTGGTGACTGGGCAGAAGCCCCTTGAAGTCACTAATGCTGAAGAAGGATTCAAGGGCAATTTAGTGGAGTGGGTAAATCAGCTCTGTGGCTCTGGCCGAAACAAGGATGTAATCGATGAGGCTCTCTGCGGAAAGGGCCACGACGAAGAAATTCTGCAGTTTCTGAAAATTGCATGCAACTGTCTGGGTCCTAGGCCGAAGGACAGGTTGTCCATGTACCAGGCTTTTGAATCATTGAAGAGCATGGGAGACCACCATGGTTTCTCTGAACACTATGATGAATTTCCTCTGATTTTTGGGAAGCAAGATCATGATAATCAAGCGTAG 1842 0.4544 MKLSEDLRGHIQGCSLVLLTIVILCCVALFSAAVAEDDVKCLRGVKESLSDPQGKLSSWSFSNISVGSLCKFVGVACWNDRENRIFGLELPDMKLSGEIPKPLEYCQSMQTLDLSGNRLYGNIPSQICTWLPYLVTLDLSNNDLSGTIPPDLANCSFLNSLLLADNQLSGIIPSQLSSLGRLKKFSVANNRLTGTIPSAFGKFDKAGFDGNSGLCGRPLGSKCGGLNKKSLAIIIAAGVFGAAASLLLGFGLWWWFFARLRGQRKRRYGIGRDDHSSWTERLRAHKLVQVTLFQKPIVKVKLADLMAATNNFHPENIINSTRTGTSYKAILPDGSALAIKRLNTCNLGEKQFRSEMNRLGQFRHPNLAPLLGFCAVEEEKLLVYKYMSNGTLYSLLHGNGTPMDWATRFRIGLGAARGLAWLHHGCQPPLLHENISSNVILIDDDFDARIVDFGLARLMATSDSNGSSFVNGGLGEFGYVAPEYSSTMVASLKGDVYGFGVVLLELVTGQKPLEVTNAEEGFKGNLVEWVNQLCGSGRNKDVIDEALCGKGHDEEILQFLKIACNCLGPRPKDRLSMYQAFESLKSMGDHHGFSEHYDEFPLIFGKQDHDNQA* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1736 613 Gene3D Phosphorylase Kinase; domain 1 272 386 - -
Vvi14g1736 613 ProSiteProfiles Protein kinase domain profile. 312 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1736 613 Pfam Leucine Rich Repeat 134 155 IPR001611 GO:0005515
Vvi14g1736 613 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 387 606 - -
Vvi14g1736 613 SUPERFAMILY Protein kinase-like (PK-like) 289 584 IPR011009 -
Vvi14g1736 613 CDD STKc_IRAK 318 587 - -
Vvi14g1736 613 Pfam Leucine rich repeat N-terminal domain 35 78 IPR013210 -
Vvi14g1736 613 SUPERFAMILY L domain-like 35 206 - -
Vvi14g1736 613 Gene3D Ribonuclease Inhibitor 35 225 IPR032675 -
Vvi14g1736 613 Pfam Protein tyrosine and serine/threonine kinase 335 520 IPR001245 GO:0004672|GO:0006468
Vvi14g1736 613 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 35 224 - -
Vvi14g1736 613 Gene3D Transferase(Phosphotransferase) domain 1 387 604 - -
Vvi14g1736 613 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 87 200 - -
Vvi14g1736 613 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 273 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1736 Vvi-Chr14 28466607 28468448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1736 16 610 Receptor kinase-like Gene Family AT3G28450 64.441 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Vvi14g1736 PK_Tyr_Ser-Thr 1.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1736 - - vvi:100853588 1208.36