Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1701 ATGGGAGAAGGAACAGAGGCTTTTCCAGATCTTGGAAGACACTGTCAACGTTCAGATTGCAATCAACTCGATTTTCTGCCGTTCAAATGTGATGGGTGTCACCAGGTGTTTTGCTTAGAACACAGAACATACAAGTCCCACGAGTGCCCCAAACCAGAACCCAACAGCAGGAAGGTGGTGGTGTGCGAAACCTGTTCGACATCGATCGAAACCACAGGGCGAGATGAAAAAGAAGAGAAGGCCATGTTAGAGAGGCATGAGAAGTCAGGGGACTGCGACCCGTCAAAGAAAAAGAAGCCAATTTGCCCAGTTCGGAGGTGCAAGGAGGTACTCACCTTCTCAAATACAAGTACCTGCAAAACTTGTCAACTCAACTTCTGCCTCAAGCATCGGTTCCCCATTGAACATGCTTGCAAGCAACGGTTGCCATCCTCGACAACGGGGGCTAAAGAGCGGTGGAGCGACAAGTTCTTGGCGGCGTTGGGGGCTAGGATTGGGAACGATTGCGCCAAGAATGGTGGGCGGACGGTGTCCCCACCTGGTACCAGTCATCCTGTCAAAGCGTGTTGA 570 0.5123 MGEGTEAFPDLGRHCQRSDCNQLDFLPFKCDGCHQVFCLEHRTYKSHECPKPEPNSRKVVVCETCSTSIETTGRDEKEEKAMLERHEKSGDCDPSKKKKPICPVRRCKEVLTFSNTSTCKTCQLNFCLKHRFPIEHACKQRLPSSTTGAKERWSDKFLAALGARIGNDCAKNGGRTVSPPGTSHPVKAC* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1701 189 Gene3D - 2 77 IPR035896 -
Vvi14g1701 189 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 172 - -
Vvi14g1701 189 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Vvi14g1701 189 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270
Vvi14g1701 189 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Vvi14g1701 189 SUPERFAMILY AN1-like Zinc finger 8 59 IPR035896 -
Vvi14g1701 189 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Vvi14g1701 189 Gene3D - 78 156 IPR035896 -
Vvi14g1701 189 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Vvi14g1701 189 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Vvi14g1701 189 SUPERFAMILY AN1-like Zinc finger 62 141 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1701 Vvi-Chr14 28172518 28173206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1701 2 169 C2H2 Transcription Factor Family AT3G28210 62.500 5.82e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1701 - - vvi:100245574 412.92