Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1679 ATGAGGAGGGGGGACTGGTACAGGGATGTGGTGTCATTTTCAGCCATGGTGGCTCTGGAGTGCACTAACGTGGGGCTGAACACGCTGTACAAGGCAGCCACCTTGAGGGGTTTGAACTACCATGTCTTTGTGGTCTATGCTTATGGTATTGCTGCGCTTGTTCTCCTTCCCTCACCCTTCATTACCCACAGGAGAGGAGTTCTTCCCCCACTGAGCTTCCCCGTTCTGTGTAAAATCTTTGTACTTGGATTAATTGGGTGTGCATCTCAGACAATGGGTTATAGAGGCATTAACATCAGTTCCCCAACTCTTGCTTCTGCCATCAGCAACCTCGTTCCAGCTTTTACTTTCATACTTGCAGTCATTTTCAGGATGGAAAAGCTAGCTTTGAGAAGCTCAAGCAGCCAGGCTAAAATCATTGGCACCATAGTATCAATATCAGGGGCATTTGTAGTGACTCTGTATAAGGGGCCCCCAATCATATTGACTCCATCTCCATCCATTTCACTTCATCAACCTCCTCACCCTCTGCGTTCATCAGAATCAAGCTGGATTATTGGTGCCCTTTTCCTTTCAGTCGAGTATTTCCTGACTCCAGTTTGGTACATTGTTCAGGCACACATCATAAAGGAGTACCCCTCAGAACCAACTGTGGTCTTTTTCTACAACTTATTCGTGTCCCTTCTGGCGGCCATTGTTGGTTTGGTCACAGAACCAAACTCAAGTGTTTGGATAGTAAGGCCAAGAATAGCATTGGCTTCTATAGTGTGCTCGGGCATTTTCGGGTCATTTTTAGGTAATACTATCCACACCTGGGCGATACGCATGAAGGGGCCAGTCTATGTAGCAATGTTCAAGCCATTAGCGATTATCATTGCAGTTACCATGGGTGTTGCGCTCCTCGGTGATTCTCTCTATCTTGGAAGTGTCATTGGCGCCACAATCATAACCATGGGGTTTTACACCGTGATGTGGGGGAAAGCACAGGAAGACATGGTTGAGGACTGTACAATCGGTAGCTTGGAATCACCATCTGCTCAAAAGGCTCCTCTATTGCAGAACTATAAAACGGAGGAAATTTAG 1083 0.4663 MRRGDWYRDVVSFSAMVALECTNVGLNTLYKAATLRGLNYHVFVVYAYGIAALVLLPSPFITHRRGVLPPLSFPVLCKIFVLGLIGCASQTMGYRGINISSPTLASAISNLVPAFTFILAVIFRMEKLALRSSSSQAKIIGTIVSISGAFVVTLYKGPPIILTPSPSISLHQPPHPLRSSESSWIIGALFLSVEYFLTPVWYIVQAHIIKEYPSEPTVVFFYNLFVSLLAAIVGLVTEPNSSVWIVRPRIALASIVCSGIFGSFLGNTIHTWAIRMKGPVYVAMFKPLAIIIAVTMGVALLGDSLYLGSVIGATIITMGFYTVMWGKAQEDMVEDCTIGSLESPSAQKAPLLQNYKTEEI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1679 360 Pfam EamA-like transporter family 187 324 IPR000620 GO:0016020
Vvi14g1679 360 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020
Vvi14g1679 360 PANTHER WAT1-RELATED PROTEIN 12 331 IPR030184 GO:0016020|GO:0022857
Vvi14g1679 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
Vvi14g1679 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1679 Vvi-Chr14 27995928 27998184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1679 1 359 Nodulin-like Gene Family AT3G28050 58.649 3.93e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1679 - - vvi:100259498 703.745