Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1672 ATGGATCTGGAACGAGTAAACCGAAACGGTCGGACCAAGAGGGAATCATGGAGGACAGTGCTGACCCTGGCTTATCAGAGCTTGGGTGTTGTTTATGGAGATTTAAGCACTTCTCCTCTCTATGTGTACAAAAGCACTTTTGCAGAGGATATTCATCATTCAGAGACAAATGAGGAGATTTATGGGGTGTTGTCTTTCGTATTCTGGACATTAACATTGATACCACTCCTCAAATATGTGTTTATTGTGCTCAGAGCAGATGATAATGGTGAAGGTGGGACTTTTGCTTTGTATTCATTGCTCTGCCGGCATGCCCGGGTGAACTCAATACCCAATTGCCAGCTTGCTGATGAGGAACTGTCCGAATACACAAGGGACGGTTTTGTATTGCTCGATAAAAATTCTGGTTCAAGCCTGAAATCGACATTGGAGAAGTATAGAGTGTTGCAGAGGGTATTGCTTGTTCTGGCTTTGATTGGGACTTGTATGGTTATCGGGGATGGAGTCCTCACACCTTCAATTTCTGTTTTTTCGGCAGTGTCGGGTTTGGAGCTTTCAATGTCAAAAGAGCATCACCTATATGTACAAGTTCCAGTTGCTTGTATAATACTGGTATTTCTGTTTGCTCTCCAACATTATGGGACTCACAGAGTAGGCTTCCTGTTTGCGCCAATTGTGATAACATGGCTTTTATGCATCAGTGCAATTGGTTTGTACAACATCTTCCACTGGAATCCCTGTGTTTATCAAGCTCTCTCCCCATACTACATGTACAAATTTTTGAAGAAGACCCAAAGGGGAGGTTGGATGTCATTGGGTGGAATTCTCTTATGCATAACAGGTTCAGAAGCTATGTTTGCAGATCTTGGACACTTTTCCCAGTTGTCAATCCAGATTGCTTTCACGTTTGTGGTTTATCCATCCTTGATCCTCGCATATATGGGACAAGCTGCTTATCTTTCCAAGCATCATACTATTGAAAGCGACTACCATATTGGGTTCTATGTATCTGTGCCTGAGAAACTAAGATGGCCTGTTCTGGGAATAGCGATACTTGCTGCAGTAGTAGGAAGTCAAGCCATCATCACAGGGACGTTCTCGATCATCAAACAATGTTCTGCTTTGGGTTGTTTCCCGAGGGTCAAAATAGTCCATACGTCATCTAAAATACATGGCCAGATTTACATTCCAGAAATCAATTGGACGTTAATGTTATTATGTTTGGCCATCACTGTTGGTTTTAGAGACACAAAACGCTTGGGCAATGCATCAGGTTTGGCAGTTATAACTGTGATGCTGGTAACCACCTGCCTAATGTCCCTAGTTATAGTCCTCTGCTGGCACAAAAGTGTCATCCTAGCTATTTGCTTTATATTCTTCTTTGGCTCCATTGAAGCGCTCTACTTCTCAGCTTCTCTCATCAAGTTCCTTGAAGGGGCTTGGGTTCCCATTGCCCTCTCGTTCATCTTCCTAATGGTTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAGTTTGATGTTCAAAGTAAGGTATCTATTAACTGGCTGCTTGGCTTGGGTCCTACCCTAGGAATTGTGCGGGTGAGGGGCATTGGTCTCATACACACTGAGCTTGTATCTGGGATCCCAGCTATTTTCTCCCACTTTGTCACAAACCTCCCAGCTTTCCATCAGGTTTTGGTCTTCCTTTGCATTAAATCTGTTCCAGTGCCTCATGTGAAACCTGAGGAGAGGTTCCTTGTGGGAAGAGTTGGGCCAAAGGAATACCGACTCTATAGGTGCATTGCAAGATATGGTTATCGTGATGTTCACAAGGATGATGTGGAGTTTGAAAAAGATCTTGTTTGTAGTATTGCAGAATTCATCCGGTCAGAAGGGCCTGAATATGATACACCACTTGTCCAAAAAGAAGAATTTGGCACAGGAATTGAAGGCCTGGAAAAGAATGAAAGAATGACTGTTGTTGGAACTTCTTCAACACAATTAGATGGTATAAAACTGCGTGAAGAATCAGACTTGTCTGATACAGTGGGCACTTCAGAGCTGAGGGAAATAAGGTCCCCAGAGAGGCCGAGGAAGAGAGTGAGATTCGTTTTGCCAGATAGTCCACAGATTGATAGAGCCGCACGGGAGGAGCTGCATGAACTGATGGAAGCCAGGGAGGCAGGGATGGCGTTTATACTGGGGCATGCATATGTGAGGGCGAAGAGGGGATCAAGTTTGATAAAGAGAATTGTAATTGATATCGGATATGATTTCTTGAGGAGGAACTCTAGAGGCCCAAATTATGCGCTAAGCATTCCTCATGCATCTACTCTGGAGGTGGGGATGATCTACCATGTTTGA 2352 0.4371 MDLERVNRNGRTKRESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIHHSETNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSIPNCQLADEELSEYTRDGFVLLDKNSGSSLKSTLEKYRVLQRVLLVLALIGTCMVIGDGVLTPSISVFSAVSGLELSMSKEHHLYVQVPVACIILVFLFALQHYGTHRVGFLFAPIVITWLLCISAIGLYNIFHWNPCVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIQIAFTFVVYPSLILAYMGQAAYLSKHHTIESDYHIGFYVSVPEKLRWPVLGIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVILAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSFIFLMVMYVWHYGTLKKYEFDVQSKVSINWLLGLGPTLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVKPEERFLVGRVGPKEYRLYRCIARYGYRDVHKDDVEFEKDLVCSIAEFIRSEGPEYDTPLVQKEEFGTGIEGLEKNERMTVVGTSSTQLDGIKLREESDLSDTVGTSELREIRSPERPRKRVRFVLPDSPQIDRAAREELHELMEAREAGMAFILGHAYVRAKRGSSLIKRIVIDIGYDFLRRNSRGPNYALSIPHASTLEVGMIYHV* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1672 783 NCBIfam potassium uptake protein 23 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi14g1672 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 782 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi14g1672 783 Pfam K+ potassium transporter 25 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1672 Vvi-Chr14 27952224 27957180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1672 1 783 Inorganic Solute Cotransporters AT5G14880 77.567 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1672 K03549 - vvi:100243919 1554.27