Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1669 ATGGCTGCTCCCAGGATATTTTCTCTGCTCTCTGCTTCTTCCACTGCTGCTTCTTTACGTTCTTTTGGTCGGTATTCTAGATGGGGTAGAGGCAGTAGCCGGTTTAGCACAGCTGTTGCAACTGAGGAGGAACCGATAACTCCACCAGTTCAAATAGATTATACTCAGCTCCTCATCAATGGAAGATTCGTTGATGCGGCATCGGGGAAAACCTTTCCAACTTTGGATCCAAGAACAGGGGATGTGATTGCTCATGTTGCTGAAGGTGAGGCTGAAGATATAAACAGGGCAGTCTCTGCTGCTCGCAAAGCATTTGATGAGGGACCATGGCCAAAGATGACCCCTTATGAAAGATCATGCATACTTTTTCGCTTTGCTGATTTGCTTGAAAAGCACTGTAGTGAAATTGCAGCCCTTGAATCATGGGATAATGGAAAGCCTTATGAACAAGCTGCAAATGTTGAAATACCAATGGTGATTCGCGTATTTCGATATTATGCTGGCTGGGCAGATAAGATTCATGGTCTCACAGTTCCTGCTGATGGGCTGCACCATGTCCAAACCCTCCATGAACCCATTGGTGTTGCAGGGCAGATTATTCCTTGGAACTTTCCTCTATTATTGTATGGTTGGAAGGTTGGGCCCGCATTAGCATGTGGTAACACTATTGTATTAAAGACTGCAGAGCAGACACCATTATCTGCCCTCTATGCGTCCAAGCTGTTATATGAGGCTGGACTCCCTCCTGGTGTTTTAAATGTGGTTTCCGGATTTGGTCCTACAGCTGGGGCCGCTCTTTCTAGTCATATGGATGTGGACAAGCTTGCTTTCACAGGGTCAACTGGCACTGGTAAGATTGTACTTGGATTGGCTGCAAAGAGCAATCTTAAGCCAGTGACTTTAGAACTTGGAGGAAAATCTCCCTTCATTGTGTGTGAGGATGCTGATGTTGATAAGGCTGTTGAGCTTTCACACACTGCTCTGTTCTATAATCAGGGACAGTCTTGCTGTTCTGGGTCACGCACATTTGTACACGAAAGCATATATGATGAGTTTATAGAGAAAGCAAAGGCACGTGCTCTGAAACGTGTAGTTGGTGATCCTTTCAAGAAGGGGGTTGAACAAGGACCCCAGATTGATTCTCAGCAATTCAACAAGATCCTTGGTTACATAAAATCTGGTATTGAAGCTGGTGCAACTCTTGAAGCTGGAGGTGAAAAATTCAGCTCCAAAGGCTACTATATTCAACCCACTGTCTTCTCAAATGTCCATGATAATATGTTGATAGCAAAAGAAGAGATCTTTGGCCCAGTGCAGTCCATCTTGAAATTCAAGGATCTTGATGAGGTGATCCGAAGGGCAAACGCTACTCACTATGGGCTGGCTGCTGGAATTTTCACTCAGAATCTAGACACTGCCAATACTCTGACTCGAGCTTTGAGAGTTGGGACAGTATGGATTAACTGCTTTTTTGTCTTTGATGCTGCAATTCCTTTTGGTGGGAGGAAGATGAGTGGGCATGGCAGAGAAAAGGGAATTTATGGCCTTAGTAACTACATGCAAGTTAAGGCTGTTGTTACGCCTTTGAAAAACCCGGCTTGGTTATAA 1608 0.4471 MAAPRIFSLLSASSTAASLRSFGRYSRWGRGSSRFSTAVATEEEPITPPVQIDYTQLLINGRFVDAASGKTFPTLDPRTGDVIAHVAEGEAEDINRAVSAARKAFDEGPWPKMTPYERSCILFRFADLLEKHCSEIAALESWDNGKPYEQAANVEIPMVIRVFRYYAGWADKIHGLTVPADGLHHVQTLHEPIGVAGQIIPWNFPLLLYGWKVGPALACGNTIVLKTAEQTPLSALYASKLLYEAGLPPGVLNVVSGFGPTAGAALSSHMDVDKLAFTGSTGTGKIVLGLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELSHTALFYNQGQSCCSGSRTFVHESIYDEFIEKAKARALKRVVGDPFKKGVEQGPQIDSQQFNKILGYIKSGIEAGATLEAGGEKFSSKGYYIQPTVFSNVHDNMLIAKEEIFGPVQSILKFKDLDEVIRRANATHYGLAAGIFTQNLDTANTLTRALRVGTVWINCFFVFDAAIPFGGRKMSGHGREKGIYGLSNYMQVKAVVTPLKNPAWL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1669 535 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 59 328 - -
Vvi14g1669 535 Pfam Aldehyde dehydrogenase family 63 525 IPR015590 GO:0016491
Vvi14g1669 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620
Vvi14g1669 535 CDD ALDH_F2BC 52 527 - -
Vvi14g1669 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Vvi14g1669 535 FunFam Mitochondrial aldehyde dehydrogenase 2 307 496 - -
Vvi14g1669 535 SUPERFAMILY ALDH-like 52 529 IPR016161 GO:0016491
Vvi14g1669 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 39 525 - -
Vvi14g1669 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 59 523 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1669 Vvi-Chr14 27925049 27928920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1669 1 535 Aldehyde Dehydrogenase Gene Family AT3G48000 75.465 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1669 K00128 - vvi:100259296 1055.43