Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1668 ATGGATGAATCCATCTTGCATACTCATAAATGGCAGAGGACTAAGTGTCTGAAATTGCTCTTTGTTGTATATATTTTTATTGTGATCGGTGCTGTAAATTTTGCAGTTTGTCATCCTTCTGCAAGTGACTGCATACTTGATTTTCAGTCTTTGTCATCCTCATCTTCAAGCTGTGAAGAGGGTGATTGGGGAAGTTTTCTAAACAAGGGCTGCTGTGGAGCAGCTTTTGGTGGATATCTCTATTCACTGGGGAAGCATGCAAATGAAACAGGGAAAGTATACTTGAATTCCACTGAACAGAGGAATTGCTTGACTTCAATGAAACGTTTTGAGGCAGATGCTGTCAGTTGTGGAATTGAGAAGCTAACAAGTGGTACTGGGGGCTGTTCTGACTTCTTTGTCTTTGATGTCACTGAAAAGTTGGGAGATGAATTTAGGAGTTTGGAGGAAAATTGCAAATTTGTGAGTCCTGATGGAGAATGGGATCAATCATGTAGTTCTTGTGTGACGAGTTGGGAAGACATAAGAGGAATACACTCCACTTTGAAGGATGAAACTGATGTTTGTAGGTTTGCAGTGCTGGTATCACTAATAAGCAGCAGAACTGAAGATGAGTCATGGTTTGGAAAAATTTACACATGCCTCAGGGAGCAGGACATTGACAAAGGTCATTTCCATTTTCAATCAAATACGCGGTCCTCTGGACGGGATGAAACATCAAGGAGTCATACAAAGTTTAAAATTAGCACAGGTTTATGGTTTCTGATAGGAGGTCTCATAGCGATGGCTTTGATAATAACCATTGGTATATGGTTCTTGTTAAGGAGATGGTGTAAATCATATGCTATACCAAAGAGAGCAGCATTAAAAGCCGTGGCACCAGAGGGGCCTGGTTGTATGAAAATCTCAATCAAGGAGGTCTACTCTGCCACAAACAATCTAAATGAGAAGAACATCATTGGTGAAGGAACAGCAGGAAAGGTATACAGAGGCATACTACAAAACAATCAACATGTTGCAGTCAAGCACATCATCAATGACAATCATATGGAGACCTTTGTCAGGGAGATCACAAGCTTATCACACATCAAACATCCAAATCTTGTGGCCTTACTGGGTTATTGTGAAGTAGAAGATGAGTGCTTCCTTGTTTATGAACTATGTCCCGATGGAAACCTCTCAGAGTGGCTTTTTGGGAAGGATAAAGTCCTGTCTTGGATTCAAAGGCTTGAGATTGCAATCGACAGTGCTCAAGGTCTTCTTTTCCTCCACACATATCCAGCAGGATGCATTGTTCACCGTGATATCAAGCCAACAAACATTCTTCTTGGAGCAAACTTTGAAGCCAAGCTGTCTGACTTTGGATTGTCCAAGGTTATTGACCAGGGTGAATCCCATGTTAGCTCAGAAGTCAGAGGAACTTTTGGCTATATGGATCCTGAGTACCAATCCAACCACCATGTCAACCCATCTGGTGATGTATACAGCTTTGGGATAGTGCTTCTTCAAATCCTCTCAGGGAAGAAAGTTATAAATCTGAATCTGAAGAAACCAATGTCTTTAGATAAAATGGCCAAAATCCTTACAAAAGATGGAAGCATAACAGAATTTGTAGATCCTAAACTTGATGGGGAGTACTCAGCAGAAGCTTTTGACCTGATACTTAAGCTTGCTCTCTCATGCACATCGCTTAAGCAACAACGGCCATCTATGGAACAAGTTGTTCTGAGGTTAGAAAAGGCCCTTGAAATCTCAACTATGGCAAAGGCTTGTACACCTCAACTGACACCAAATCGTCTATCATCTGGAGAAAAGAGATTTCTCGACGAGATTCATTGTTACAATAATATCTTGTTTGACAGTACATGA 1869 0.4093 MDESILHTHKWQRTKCLKLLFVVYIFIVIGAVNFAVCHPSASDCILDFQSLSSSSSSCEEGDWGSFLNKGCCGAAFGGYLYSLGKHANETGKVYLNSTEQRNCLTSMKRFEADAVSCGIEKLTSGTGGCSDFFVFDVTEKLGDEFRSLEENCKFVSPDGEWDQSCSSCVTSWEDIRGIHSTLKDETDVCRFAVLVSLISSRTEDESWFGKIYTCLREQDIDKGHFHFQSNTRSSGRDETSRSHTKFKISTGLWFLIGGLIAMALIITIGIWFLLRRWCKSYAIPKRAALKAVAPEGPGCMKISIKEVYSATNNLNEKNIIGEGTAGKVYRGILQNNQHVAVKHIINDNHMETFVREITSLSHIKHPNLVALLGYCEVEDECFLVYELCPDGNLSEWLFGKDKVLSWIQRLEIAIDSAQGLLFLHTYPAGCIVHRDIKPTNILLGANFEAKLSDFGLSKVIDQGESHVSSEVRGTFGYMDPEYQSNHHVNPSGDVYSFGIVLLQILSGKKVINLNLKKPMSLDKMAKILTKDGSITEFVDPKLDGEYSAEAFDLILKLALSCTSLKQQRPSMEQVVLRLEKALEISTMAKACTPQLTPNRLSSGEKRFLDEIHCYNNILFDST* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1668 622 Gene3D Transferase(Phosphotransferase) domain 1 389 594 - -
Vvi14g1668 622 SMART serkin_6 314 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1668 622 SUPERFAMILY Protein kinase-like (PK-like) 298 578 IPR011009 -
Vvi14g1668 622 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 237 580 - -
Vvi14g1668 622 Gene3D Phosphorylase Kinase; domain 1 281 387 - -
Vvi14g1668 622 ProSiteProfiles Protein kinase domain profile. 314 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1668 622 FunFam Serine/threonine kinase protein 278 387 - -
Vvi14g1668 622 FunFam probable receptor-like protein kinase At5g59700 388 596 - -
Vvi14g1668 622 Pfam Protein kinase domain 316 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1668 622 Pfam SPARK 40 181 IPR043891 -
Vvi14g1668 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1668 Vvi-Chr14 27921067 27924017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1668 286 584 Receptor kinase-like Gene Family AT1G49100 40.523 2.05e-59 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Vvi14g1668 Pkinase 6.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1668 - - vvi:100264470 1248.03