Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1654 ATGAAGGAGAAGAGTGACGGGTTTGTGAGGGCAGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCTCAGCAGAGCATGGACTATGGAGCAGAAGAAGGAGCAGCAGGAAGAGAGGCCCAATACTCGAGAAGAGTGGGAGATTGATCCTTCCAAGCTCGTCATCAAGAGTGTCATCGCTCGTGGCACTTTTGGGACGGTTCATCGTGGGGTTTACGATGGCCAAGATGTTGCAGTTAAACTTCTTGATTGGGGAGAGGAGGGCCACAGAACAGAGGCTGAAATAGCTTCACTTAGAGCAGCTTTTACACAAGAAGTTGTTGTATGGCACAAGCTTGATCATCCTAATGTAACTAAGTTCATTGGGGCTACAATTGGCTCATCAGAGCTAAACATACAAACAGAAAATGGTCACATTGGCATGCCAAGTACTGTATGTTGTGTTGTTGTTGAATATCTTCCTGGGGGAGCACTGAAATCTTACCTCATAAAGAACCATAGAAGGAAGCTGGCTTTCAAAGTAGTTGTCCAACTGGCACTAGATCTTGCACGAGGGTTGAGCTATCTTCATTCTAAGAAGATTGTCCACAGAGATGTGAAAACAGAGAACATGCTTCTGGACAAGACTCGTACTTTAAAAATTGCTGACTTTGGGGTTGCTCGCATGGAGGCTTCAAATCCTAATGACATGACAGGCGAGACTGGAACCCTTGGTTACATGGCACCAGAGGTTCTCAATGGCAACCCGTATAATAGGAAATGCGATGTGTACAGTTTTGGTATCTGCTTGTGGGAAATTTATTGCTGTGACATGCCATATCCAGATCTCAGCTTCTCAGAAGTGACCTCAGCTGTTGTCCGCCAGAATCTGAGGCCTGAGATACCTCGTTGTTGCCCGAGCTCTCTTGCGAATGTAATGAAGCGATGCTGGGATGCTAACCCTGACAAGCGCCCAGAGATGGACGAGGTGGTATCGATGCTGGAGGGCATTGACACATCCAAGGGTGGAGGTATGATCCCTCTAGATCAACCTCAAGGCTGTTTCTGTTTTGGCAAGTACCGAGGGCCTTGA 1083 0.4709 MKEKSDGFVRADQIDLKSLDEQLQRHLSRAWTMEQKKEQQEERPNTREEWEIDPSKLVIKSVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGHRTEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATIGSSELNIQTENGHIGMPSTVCCVVVEYLPGGALKSYLIKNHRRKLAFKVVVQLALDLARGLSYLHSKKIVHRDVKTENMLLDKTRTLKIADFGVARMEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEGIDTSKGGGMIPLDQPQGCFCFGKYRGP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1654 360 FunFam Serine/threonine-protein kinase HT1 157 342 - -
Vvi14g1654 360 MobiDBLite consensus disorder prediction 30 49 - -
Vvi14g1654 360 SUPERFAMILY Protein kinase-like (PK-like) 26 331 IPR011009 -
Vvi14g1654 360 SMART serkin_6 57 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1654 360 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 48 335 - -
Vvi14g1654 360 Gene3D Transferase(Phosphotransferase) domain 1 157 342 - -
Vvi14g1654 360 CDD STKc_MAP3K-like 63 331 - -
Vvi14g1654 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Vvi14g1654 360 PRINTS Tyrosine kinase catalytic domain signature 154 167 IPR001245 GO:0004672|GO:0006468
Vvi14g1654 360 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672|GO:0006468
Vvi14g1654 360 PRINTS Tyrosine kinase catalytic domain signature 302 324 IPR001245 GO:0004672|GO:0006468
Vvi14g1654 360 PRINTS Tyrosine kinase catalytic domain signature 192 210 IPR001245 GO:0004672|GO:0006468
Vvi14g1654 360 FunFam Kinase suppressor of Ras 1 46 141 - -
Vvi14g1654 360 Pfam Protein tyrosine and serine/threonine kinase 58 331 IPR001245 GO:0004672|GO:0006468
Vvi14g1654 360 PIRSF ILK 8 340 - -
Vvi14g1654 360 Gene3D Phosphorylase Kinase; domain 1 46 140 - -
Vvi14g1654 360 ProSiteProfiles Protein kinase domain profile. 57 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1654 Vvi-Chr14 27813126 27819211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1654 4 360 MAP Kinase Kinase Kinase AT3G22750 69.806 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vvi14g1654 PK_Tyr_Ser-Thr 4.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1654 - - vvi:100268039 743.806