Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1640 ATGAACGGTTCTCTTGACCAGTACGGTTGTATCAAGTACCAAAACGACATTGCTCAGGAGTTCAACCAGCAGCTAAAGGACGGTGTAACCCAACTTAAGACCCAGCTCCCACTTGCTACATTCACCTACATTGACATCTATTCAGCTAAATTTTCACTAATCAGCGATGCAAAGAATCAAGGCTTTGATGACCCTTTGAACTACTGTTGTGGTAGTCTATTTCCTTATCCAGTCTTCTGTGGCTCTACCATGGAAGTGAATGAGACAGTGTATGGTAATCCTTGTGATGATCCCTGGGCTCGCATTAGCTGGGATGGCATACACTATACTGAGGCTGCCAATCGATGGGTTGCAACCAAGATTATCAGCCGTTCACTGTCTGATCCTCCGGTCCCAATTACAAATGCTTGTTCTTAG 417 0.4484 MNGSLDQYGCIKYQNDIAQEFNQQLKDGVTQLKTQLPLATFTYIDIYSAKFSLISDAKNQGFDDPLNYCCGSLFPYPVFCGSTMEVNETVYGNPCDDPWARISWDGIHYTEAANRWVATKIISRSLSDPPVPITNACS* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1640 138 Pfam GDSL-like Lipase/Acylhydrolase 7 120 IPR001087 GO:0016788
Vvi14g1640 138 Gene3D SGNH hydrolase 2 126 IPR036514 -
Vvi14g1640 138 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 6 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1640 Vvi-Chr14 27737063 27737584 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1640 10 122 Pollen Coat Proteome AT1G75910 24.348 8.07e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1640 - - vvi:100853218 296.589