Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1634 ATGGCTCTTTATCCTCTTCAGCTCTCCAGTTCCAGAGCTCTTCATCAATCTTCATTCCTCGGCCCTTTCTCCGCCTCTTCTTGGGGCAGAGATTTCTTGTGCTTCCCCAATGCAACTGCCGCTGTTACTTCGTCGAAAAAGGCGATTGCTAGGGTTTATGCAATGTCGAGTGACACTTCTTCTTCGTTCAAGATGAATCTGAATGAGTATATGGTCACTCTTGAGAAACCGCTCGGTATTCGGTTCGCTCTCTCCGCGGACGGCAAAGTCTTTGTCCATGCTCTTAAGAAAGGGGGAAATGCAGAGAAGTCGAGAATAATTATGGTAGGGGACACTTTGAAAAAGGCAAGTGACTCGCCTGATGGTGGCCTTGTTGAGATCAAAGACTATGGTGATACACAGAAGATGCTGGAGCAGAAAACAGGATCTTTTAGTCTCGTTCTTGAGAGGCCCTTCTCTCCTTTTCCAATTCAACAACTGCATCTAATGAGTGATCTTGATATTTTATTTAATAGAGGTCGTGTTCCTGTTGCCACTTGGAACAAAACTATATTGGCATCAAATTTGCAAACATGTTCTGACGGTGGTGGGAATTCTGGGTTTGTCACATTTTCACCAAAGTTTATAACTTCCCAAGGATGGAAGTTTCTGATGGGTCAAAATGGGGATGTTAACTCGAAAATGCAGAGAAACATTCTCTCTCCACCCATCAGCCAACTTGTTTGTATTTTTTCAGAGGAAGAGTCTGGAGATGTTGAATGGGCTCATGGGAGCTTTCCACTGGATGAATATATTAAGGCACTGGATCGTTCTAAAGGCGAACTATATTATAATCACTCTCTTGGTATGCGTTACAGTAAGATTACAGAGCAAATATACGTAGGATCATGCATCCAAACCGAAGCCGATGTGGAAACTTTGTCAAATGCAGGAATCACTGCCATACTGAATTTCCAGAGTGGAATTGAAGCAGAAAATTGGGGAATCAATTCCAGATCAATCAATGAGTCATGCCAAAAATTCAATATCCTTATGATCAACTATCCTATTAGGGAGGTTGATTCTTATGGTATGAGGAAAAAACTACCATTTTGTGTTGGGCTCTTATTGCGCTTGTTAAAAAAGAATCATCGTGTGTTTGTCACTTGTACTACTGGTTTTGATCGGTCACCTGCTTGTGTGGTTGCATATCTGCACTGGATGACAGATACTTCCCTTCATGCAGCTTACAATTTCGTGACCGGGTTGCATTCATGCAGGCCTGACAGACCAGCAATTGCTTGGGCAACGTGGGATCTTATAGCCATGGTCGAAAAAGGCAAACACGATGGGCCTGCAACCCATGCTGTGACCTTTGTGTGGAATGGGCACGAGGGGGAGGAGGTATTTTTGGTTGGAGATTTTACTGCAAACTGGAAAGAACCAATTAAGGCAGTCCACAAGGGTGGATCAAGATATGAAGTTGAAGTTAGACTTACACAAGGGAAGTACTACTATAAGTTTATTACTAATGGGCAATGGAGGCATTCGACAGCTTCACCAACAGAAAGGGATGAAAGGGCGAATGTTAACAATGTGATTGTGGTTGGTGATATTGCCAGTGTCAGGCCTTCTATCCAACAACAAAAGAAAGACTCCAATGTTGTAAAGGTGATTGAGAGGCAGTTGACCGAAAATGAGCGATTTATGCTGGCAAAGGCAGCCCGCTGCATTGCATTTTCTGTCTGTCCGATCAGACTGGCTCCCAAATAG 1752 0.4338 MALYPLQLSSSRALHQSSFLGPFSASSWGRDFLCFPNATAAVTSSKKAIARVYAMSSDTSSSFKMNLNEYMVTLEKPLGIRFALSADGKVFVHALKKGGNAEKSRIIMVGDTLKKASDSPDGGLVEIKDYGDTQKMLEQKTGSFSLVLERPFSPFPIQQLHLMSDLDILFNRGRVPVATWNKTILASNLQTCSDGGGNSGFVTFSPKFITSQGWKFLMGQNGDVNSKMQRNILSPPISQLVCIFSEEESGDVEWAHGSFPLDEYIKALDRSKGELYYNHSLGMRYSKITEQIYVGSCIQTEADVETLSNAGITAILNFQSGIEAENWGINSRSINESCQKFNILMINYPIREVDSYGMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRSPACVVAYLHWMTDTSLHAAYNFVTGLHSCRPDRPAIAWATWDLIAMVEKGKHDGPATHAVTFVWNGHEGEEVFLVGDFTANWKEPIKAVHKGGSRYEVEVRLTQGKYYYKFITNGQWRHSTASPTERDERANVNNVIVVGDIASVRPSIQQQKKDSNVVKVIERQLTENERFMLAKAARCIAFSVCPIRLAPK* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1634 583 SUPERFAMILY E set domains 448 530 IPR014756 -
Vvi14g1634 583 CDD E_set_AMPKbeta_like_N 450 529 - -
Vvi14g1634 583 ProSiteProfiles Dual specificity protein phosphatase domain profile. 284 442 IPR020422 GO:0006470|GO:0008138
Vvi14g1634 583 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 24 581 - -
Vvi14g1634 583 SUPERFAMILY PDZ domain-like 52 156 IPR036034 GO:0005515
Vvi14g1634 583 Pfam Dual specificity phosphatase, catalytic domain 292 420 IPR000340 GO:0008138|GO:0016311
Vvi14g1634 583 FunFam Phosphoglucan phosphatase LSF1 chloroplastic 277 442 - -
Vvi14g1634 583 Gene3D Immunoglobulins 437 533 IPR013783 -
Vvi14g1634 583 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 276 416 IPR029021 -
Vvi14g1634 583 SMART dsp_5 284 439 IPR020422 GO:0006470|GO:0008138
Vvi14g1634 583 Pfam Glycogen recognition site of AMP-activated protein kinase 450 530 IPR032640 -
Vvi14g1634 583 CDD DSP_laforin-like 283 428 IPR045204 GO:0019203
Vvi14g1634 583 ProSiteProfiles PDZ domain profile. 71 152 IPR001478 GO:0005515
Vvi14g1634 583 Gene3D Protein tyrosine phosphatase superfamily 277 564 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1634 136 583 Protein tyrosine phosphatase (PTP) family AT3G01510 76.116 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1634 - - vvi:100252584 1182.16