Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1632 ATGGTGGGTGGGAGGGGGAGAGGGATACGTTTTAGCAAACTCTATACTTTTTCGTGTGTTCGATCTTCGTTTAGGGAAGATCGTTCACAAATTGGGCAGAAAGGGTACACGAGAGTAGTGTATTGCAACGATCCTGATAATCCAGAAGCGGTTCAGCTAAATTATAGGGGGAATTATGTATCCACTACCAAGTATACTGCAGTGAATTTTTTACCGAAGTCTTTGTTTGAGCAATTTAGGAGGGTTGCGAATATATATTTTCTTGTTGTGGCTTGTGTTTCGTTTAGTCCACTGGCTCCTTACTCCGCCCTTAGTGTTCTTGCACCGTTGTTGGTGGTTATTGGAGCTACCATGGCCAAGGAAGCTGTTGAAGATTGGAGGCGAAGAAAACAGGATATAGAAGCCAACAATCGGAGGGTCCAAGTGTATAGGAATAATAGTTTCTGCAAGGCCAAATGGAAGGATCTCAGAGTTGGTGACATTGTTAAGGTTGACAAGGATGAATTTTTTCCTGCTGATTTGTTTCTACTTTCATCAAGCTATGAGGATGGGTTTTGTTATGTTGAGACAATGAACCTTGATGGAGAGACTAATCTGAAACTTAAACATGCTTTGGAGGAGACATCTTCTCTCCGTGATGAAAAATCATTTCAGCAATTTAAGGCAGTCATCAAGTGTGAGGACCCAAATGAAGATCTTTATTCCTTTGTTGGAACTTTGTCCTATAATGGCACCCCCCATGAACTTTCCTTGCAACAGATTCTTTTGAGAGATTCTAAGCTTAGAAATACTGATTGCATTTATGGTGTAGTTATTTTTACTGGGCATGACACAAAAGTGATGCAGAATGCAACAGATCCTCCTTCAAAAAGGAGTAAGATTGAGAGGAGAATGGATAAGATAGTCTATATCCTCTTCAGTACTCTAGTTTTAATATCTTTTATTGGATCTGTTTTTTTTGGAACTGAGACTAGGAAAGATATAAGTGGTGGAAAGTATAGAAGATGGTACCTTCGACCAGATGATACAACTGTGTTTTATGACCCCCAAAGACCAGTACTAGCTGCATTTCTTCATTTCTTGACAGGGCTTATGTTGTATGGATATTTGATACCAATATCATTGTATGTCTCCATTGAGATTGTGAAAGTTTTACAGAGTATTTTCATTAACCAGGATCAGGATATGTATTATGAGGAAACAGACAAACCAGCACATGCACGCACGTCTAATTTGAATGAGGAACTTGGTCAAATTGATACAATACTGTCTGACAAAACAGGTACTTTGACATGTAACTCTATGGAGTTTGTAAAATGTTCAATAGCAGGCACTGCTTATGGACGTGGTATGACAGAAGTGGAAAGGGCATTGGCGAGGAGAAATGATAGGCCACATGAAGTGGGTGATGCTTCATCTGACTTACTAGGTGATAGCGGTGAAATCAACTTGGGAAAGCCAATTAAGGGTTTCAACTTTAGAGATGAACGCATAATGCATGGTCGGTGGGTTAATGAACCTCATGCAGATGTTATACAAAGGTTCTTTCGAGTATTGGCAATTTGCCATACGGCCATTCCAGATATAAATGAAGGTGAAATTTCTTATGAAGCCGAGTCACCAGATGAAGCAGCCTTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTTTCAAGGAAACAAACGTGCATCTCATTGCATGAGTTAGATCATAAGAGTGGCGGAGAGGTTGACAGAACATACAAGCTTCTTCATGTCTTAGAATTCAAGAGTTCTCGTAAAAGAATGTCTGTGATTGTAAGGAATCCAGAGAATCAGTTGTTGCTCCTTTCCAAGGGCGCAGACAGTGTAATGTTTGACAGACTCTCCAAGGAGGGGCGAATGTTTGAGGCTCAGACCCGGGATCACATCAGAAAATATGCTGAGGCAGGGTTACGTACTTTGGTACTTGCGTACCGTGATCTTGATGAAGAAGAGTATGAGGCATGGGAAGAGGAGTTTTCAAGGGCCAAAACTTCTGTTGGTGCAGATCATGATGCTTTGGTGGATGCTGCTTGTGATAAAATTGAGAGGGATTTAATTCTTCTTGGTGCTACAGCTGTTGAAGACAAGCTGCAAAAAGGGGTTCCTGAGTGCATTGACAGGCTTGCACAGGCTGGTATTAAAATCTGGGTCTTAACTGGTGATAAAATGGAAACTGCAATTAATATTGGGTATGCATGTAGTTTACTGAGACAAGGGATGAAGCAAATAGTGATTACACTAGATTCACAAGATATCGATGTTTTGCGGAAACAGGGGGACAAGGAGGCCATTGCAAAGGCTTCTTGTGAAAGCATAAGGAAGCAAATTAGAGAAGGAAAATCTCAACTTACTTCAGCTAAAGAAAATTCTGTCTCATTTGCTCTGATAATTGATGGTGAATCTCTGAGTTTTGCTCTCAACAAGAATCTTGAGAAGTCATTTTTGGAACTTGCAATAGATTGTGCTTCCGTTATTTGCTGTCGCTCTTCTCCCAAACAGAAAGCTCTTGTTACAAGATTGGTCAAAATGGGGACAGGCGAAACAACTCTAGCAATAGGTGATGGGGCAAATGATGTTGGCATGCTTCAAGAGGCTGATATTGGAGTTGGCATTAGTGGTGTCGAAGGCATGCAGGCTGTGATGTCCAGTGATTTTGCAATAGCTCAATTCCGTTTTCTGGAACGTTTGTTGCTGGTTCATGGCCATTGGTGTTACAGGCGAATATCAATGATGATATGCTACTTCTTCTACAAGAACATTGCTTTTGGGTTTACCCTATTTTGGTTTGAGGCTTATGCTTCTTTCTCTGGTCAACCTGCTTATAATGATTGGTACATGTCCTTCTACAATGTCTTCTTCACTTCACTTCCTGTGATTGCTCTTGGTGTTTTCGATCAGGATGTTTCCGCACGCCTTTGCCTCAAGTACCCTTTATTATATCAGGAAGGAGTACAGAACATTCTCTTCAGCTGGCCCCGAATACTTGGGTGGATGTCTAATGGGGTTATAAGCTCTATAATTATCTTCTTCTTCACCACCAAGTCCATCATTCCCCAAGCCTTCCGAAGAGACGGCCAAGTAACTGACTTCGAAGTCCTTGGGGCCACAATGTATACTAGTGTAGTGTGGGCAGTGAACTGCCAAATAGCACTCTCCATCAACTACTTCACTTGGATCCAACACTTCTTCATTTGGGGCAGCATCATCTTCTGGTATATATTCTTGGTGATTTATGGATCTCTCTCCCCAGTGGTGTCCACAACAGCATACCGGGTTCTCGTTGAAGCCTGTGCTCCCAGTGTTCTCTACTGGCTGGCCACCCTTCTCGGTGTCATCTCCACTTTGTTGCCCTACTTTTCATACAGGGCTTTCCAGACAAGATTTCGACCCTTGTACCATGATATAATTCAACAAAAACGGTCAGAAGGCTTAGAGACTGACGACACTCCCAATGAGTTGCCTCACCGGGTCAGGGACAAAATACAGCATCTGAAGATGGGACTGAGGCGGAGTTGA 3543 0.4197 MVGGRGRGIRFSKLYTFSCVRSSFREDRSQIGQKGYTRVVYCNDPDNPEAVQLNYRGNYVSTTKYTAVNFLPKSLFEQFRRVANIYFLVVACVSFSPLAPYSALSVLAPLLVVIGATMAKEAVEDWRRRKQDIEANNRRVQVYRNNSFCKAKWKDLRVGDIVKVDKDEFFPADLFLLSSSYEDGFCYVETMNLDGETNLKLKHALEETSSLRDEKSFQQFKAVIKCEDPNEDLYSFVGTLSYNGTPHELSLQQILLRDSKLRNTDCIYGVVIFTGHDTKVMQNATDPPSKRSKIERRMDKIVYILFSTLVLISFIGSVFFGTETRKDISGGKYRRWYLRPDDTTVFYDPQRPVLAAFLHFLTGLMLYGYLIPISLYVSIEIVKVLQSIFINQDQDMYYEETDKPAHARTSNLNEELGQIDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVERALARRNDRPHEVGDASSDLLGDSGEINLGKPIKGFNFRDERIMHGRWVNEPHADVIQRFFRVLAICHTAIPDINEGEISYEAESPDEAAFVIAARELGFEFFSRKQTCISLHELDHKSGGEVDRTYKLLHVLEFKSSRKRMSVIVRNPENQLLLLSKGADSVMFDRLSKEGRMFEAQTRDHIRKYAEAGLRTLVLAYRDLDEEEYEAWEEEFSRAKTSVGADHDALVDAACDKIERDLILLGATAVEDKLQKGVPECIDRLAQAGIKIWVLTGDKMETAINIGYACSLLRQGMKQIVITLDSQDIDVLRKQGDKEAIAKASCESIRKQIREGKSQLTSAKENSVSFALIIDGESLSFALNKNLEKSFLELAIDCASVICCRSSPKQKALVTRLVKMGTGETTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVISSIIIFFFTTKSIIPQAFRRDGQVTDFEVLGATMYTSVVWAVNCQIALSINYFTWIQHFFIWGSIIFWYIFLVIYGSLSPVVSTTAYRVLVEACAPSVLYWLATLLGVISTLLPYFSYRAFQTRFRPLYHDIIQQKRSEGLETDDTPNELPHRVRDKIQHLKMGLRRS* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1632 1180 FunFam Phospholipid-transporting ATPase 539 697 - -
Vvi14g1632 1180 Gene3D - 562 671 IPR023299 GO:0000166
Vvi14g1632 1180 FunFam Phospholipid-transporting ATPase 697 901 - -
Vvi14g1632 1180 SFLD p-type atpase 405 912 IPR044492 -
Vvi14g1632 1180 Gene3D - 693 901 IPR023214 -
Vvi14g1632 1180 Pfam Phospholipid-translocating P-type ATPase C-terminal 889 1139 IPR032630 -
Vvi14g1632 1180 NCBIfam HAD-IC family P-type ATPase 106 212 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi14g1632 1180 NCBIfam HAD-IC family P-type ATPase 832 943 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi14g1632 1180 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Vvi14g1632 1180 Coils Coil 116 136 - -
Vvi14g1632 1180 CDD P-type_ATPase_APLT_Dnf-like 57 1021 - -
Vvi14g1632 1180 Gene3D - 114 285 - -
Vvi14g1632 1180 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 662 IPR023299 GO:0000166
Vvi14g1632 1180 Pfam Phospholipid-translocating ATPase N-terminal 40 104 IPR032631 -
Vvi14g1632 1180 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Vvi14g1632 1180 PRINTS P-type cation-transporting ATPase superfamily signature 747 757 - -
Vvi14g1632 1180 PRINTS P-type cation-transporting ATPase superfamily signature 861 880 - -
Vvi14g1632 1180 Pfam Cation transport ATPase (P-type) 530 624 - -
Vvi14g1632 1180 SFLD C1.7: P-type atpase like 405 912 - -
Vvi14g1632 1180 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 38 1150 - -
Vvi14g1632 1180 NCBIfam phospholipid-translocating P-type ATPase 55 1146 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vvi14g1632 1180 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Vvi14g1632 1180 FunFam Phospholipid-transporting ATPase 116 285 - -
Vvi14g1632 1180 SUPERFAMILY HAD-like 418 916 IPR036412 -
Vvi14g1632 1180 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 1139 IPR023298 -
Vvi14g1632 1180 Coils Coil 778 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1632 Vvi-Chr14 27671486 27684057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1632 1 1152 Primary Pumps ATPases AT1G68710 65.965 0.0 1625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1632 K01530 - vvi:100259356 2327.75