Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1631 ATGGAGCATGAGAAAAAATTTCCTTTGGATGCAAAAGACTACAAATTATATGAGGAAGTTGGTGAAGGTGTTAGTGCCACTGTGTACAGGGCTCTCTGCATTCCACTTAATGAGATTGTTGCTATCAAGGTTCTTGATCTGGAAAAATGTAACAATGACCTGGATGGTATTCGTCGAGAGGTGCAGACAATGAGCTTGATTGATCATCCAAATTTATTACAGGCACATTGCTCTTTCACTTCTGGTCACACCCTCTGGGTTGTGATGCCATATATGGCTGGGGGATCTTGCCTTCATATAATGAAATCTGAGTATCCAGAAGGTTTTGATGAACCTGTTATTGCCACCTTATTACGAGAAGTACTTAAAGCCCTTGTTTATCTTCATAACCATGGGCATATCCACAGAGATGTGAAGGCTGGGAATATTTTGATTGATTCTAATGGTGCAGTCAAGTTAGCAGACTTTGGAGTGTCAGCATGCATGTTTGATGCTGGAGATAGGCAACGTTCAAGAAATACTTTTGTTGGAACTCCATGCTGGATGGCTCCTGAAGTTATGCAGCAGTTGCATGGATATGATTTTAAAGCAGACATCTGGTCATTTGGAATAACAGCACTTGAACTTGCTCATGGCCATGCTCCATTTTCTAAGTATCCACCAATGAAGGTTTTGCTGATGACCTTACAAAATGCACCTCCAGGTCTTGACTATGAAAGAGACAAAAAATTTTCAAAGTCATTCAAAGAGATGGTAGCCACCTGCTTAGTGAAGGATCCAAAGAAACGTCCGACTTCAGAGAAGCTTTTTAAGCACAGTTTCTTTAAACATGCACGTTCAAATGAATATTTAGCTCGTACCATTCTTGAGGGCCTTACTCCACTAGGTGATCGTTTTAGGACACTGAAGGCAAAAGAAGCTGATCTTCTTGTACAGAACAAGGCTTTGTATGGGGACAAAGAGCAATTATCACAGCAAGAATACATACGAGGAATCAGTGCCTGGAATTTTAATCTGGAGGATTTGAAAAATCAGGCTGCCCTTATTCAGGATTATGATGTCATTTCAAATGTAGATGATCCAGATTGTTCAAATGCTGCACCGAGTCATGAGGATGGGCTTAATGATCTATCTAATTTGGAGAATTCGCTCGCTTCATTTCCCATTCAACCTCTTCAAGCACTTAAAGGTTATTTTGATGTTTGTGAGGATGATGGGAATGCTAGTAGTTTGAGTTGGAGAGATGTAATGCAGTCAGAATCTGAACAACAATCAGTGGATCAAGAAGCTGAAAAGGATGATGGTGAGAATTTCGGGCGGAGTAGCTCTTTACCACGCCAAATCATTCCTGGGCATAAAAAATTTTTTAGCGGTTCACTGCTACAGGATAATGCTCTCTCTCCTAAAAAAGTTAATGGTGATGGGGACAGGGAAAATATACAATCAAGATATCAACCCGAGCGGAACTATAGTGGTCCATTATTACATCGTCAAAAAAGAGATACAAATAACATTTCATCTGTGGAGGATACACCAGAGGGAGCAGTTGTGCAATGCAAGGGCCGTTTTAAAGTCACTTCAGCAGAGCTCAGTCCCAAGGGTCCTACAAATTGCTTCTTCAGCCAAGTTTCTGGAGGTTCAACAAGTCCAACAACACCGAGCCTTACAGCTGCCTCAATTCTTCCATCACTGCAATTTGTTTTGCAGCAGAACACCATGCAAAGGGAAGGAATAATGAAATTGATCAAATATGTGGAGCAGTCCTGTGGCAATCACATAGAAGAGGCAGGCTCTATCGACCTTTCACAGATACATGCTGTTTCTACTAGGGAGAAAGAGCTTCAGTCTCAGGTGATTCATCTGCAACAAAGCATTGGGACTCTAGTTGAAGAATTGCAAAGACAGAAGTTGAAAAATGCTCAGGTAGAAAGACACTTGAATGCAGTAGCTAACAAGGTGGGAAAGGTAAGGAGAGGAAATGGAGCATGA 1989 0.4128 MEHEKKFPLDAKDYKLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLQAHCSFTSGHTLWVVMPYMAGGSCLHIMKSEYPEGFDEPVIATLLREVLKALVYLHNHGHIHRDVKAGNILIDSNGAVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKKFSKSFKEMVATCLVKDPKKRPTSEKLFKHSFFKHARSNEYLARTILEGLTPLGDRFRTLKAKEADLLVQNKALYGDKEQLSQQEYIRGISAWNFNLEDLKNQAALIQDYDVISNVDDPDCSNAAPSHEDGLNDLSNLENSLASFPIQPLQALKGYFDVCEDDGNASSLSWRDVMQSESEQQSVDQEAEKDDGENFGRSSSLPRQIIPGHKKFFSGSLLQDNALSPKKVNGDGDRENIQSRYQPERNYSGPLLHRQKRDTNNISSVEDTPEGAVVQCKGRFKVTSAELSPKGPTNCFFSQVSGGSTSPTTPSLTAASILPSLQFVLQQNTMQREGIMKLIKYVEQSCGNHIEEAGSIDLSQIHAVSTREKELQSQVIHLQQSIGTLVEELQRQKLKNAQVERHLNAVANKVGKVRRGNGA* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1631 662 MobiDBLite consensus disorder prediction 415 446 - -
Vvi14g1631 662 Gene3D Phosphorylase Kinase; domain 1 3 90 - -
Vvi14g1631 662 Coils Coil 632 652 - -
Vvi14g1631 662 CDD STKc_OSR1_SPAK 12 275 - -
Vvi14g1631 662 FunFam Serine/threonine-protein kinase BLUS1 3 91 - -
Vvi14g1631 662 SMART serkin_6 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1631 662 MobiDBLite consensus disorder prediction 425 439 - -
Vvi14g1631 662 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Vvi14g1631 662 MobiDBLite consensus disorder prediction 466 494 - -
Vvi14g1631 662 Pfam Protein kinase domain 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1631 662 FunFam serine/threonine-protein kinase BLUS1 isoform X1 95 328 - -
Vvi14g1631 662 SUPERFAMILY Protein kinase-like (PK-like) 12 303 IPR011009 -
Vvi14g1631 662 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Vvi14g1631 662 ProSiteProfiles Protein kinase domain profile. 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1631 662 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 636 IPR047173 GO:0043539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1631 Vvi-Chr14 27641554 27654851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1631 4 652 MAP Kinase Kinase Kinase Kinase AT5G14720 67.012 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Vvi14g1631 Pkinase 8.9e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1631 K08835 - vvi:100264532 1304.27