Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1614 ATGGGAAAAATGGGCAAGTGGATCAGGGCGAGTGGTCCTATTCCAAAATATGATGTTTTTATGGGAGTGATTCATATCATTGCTCAAAGAATGCATATCACTGCATTGGCTCTCTCTCCTTCAGCTCCGTTTCTGAAACCAAAAAATCTTCTCAATCGAAACCCTAACCCTAGCCCTGGAGTCGTTCCAGTTCAACTCCACCTCTTAACTTCTACCAATGGTCTCTCATGTCACAGAAGTTCATCTCTCTTCTCTTCTCTCTCCTCTGTTTTGTTCCCATATCCAAACCCCAGATTCAGTGGCTTCAAGTTCAGAGCCTCTTCGGTTCCCGAGAATGCTGAAGAGACCGAGAAATCGAGCAATTTGGGTGGTATTTTGCAGCTCGGGTCTATGTTCGCGATCTGGTATCTGTTGAACATTTACTTCAACATCTTCAACAAGCAGATCCTGAAGGTCTATCCATTCCCAGCAACAGTTACGGCATTTCAGTTTGGATGTGGGACTGTGCTGGTTATTTTGATGTGGGCATTCAACCTATACAAAAGACCAAAAATCAGTAAATCACAGTTTTCAGGAATCCTAATCCTGGCTGTGACACACACCATGGGTAACCTTTTGACCAACTTAAGCCTCAGAAAAGTTGCTGTTTCATTCACTCACACAATCAAAGCTATGGAGCCCTTTTTTACAGTTGTTCTTGCTACCCTCTTTCTTGGGGAGAAACCCACTCTCCCGATTGTTTCTTCCCTTGTTCCAATTGTAGGTGGAGTGGCACTGGCCTCATTCACAGAATCCTCTTTTAACTGGACTGGTTTCTGGAGTGCAATGGCTTCCAATTTGACAAATCAATCACGTAATGTGTTCAGCAAAAAATTCATGGTCAACAAAGAGGAAGCTTTGGATACCATCAACCTCTTCTCAGTAATAACAGTCATTTCTTTCCTCCTGTGTACCCCTGTGGCTATTTTCATTGAAGGCATCAAGTTTACTCCGTCATACCTGCAATTTGCAGCAAGTCAAGGTTTGAATGTTAGAGAGCTATGTGTGAGATCTCTTTTGGCTGGGATCTGCTTCCATTCTTATCAGCAGGTTTCTTATACGATACTACAGATGGTATCTCCTGTGACACATGCAGTTGGAAATTGTGTGAAGCGAGTAGTGGTGATCATCTCTTCAGTCATCTTCTTCCAAACACCTGCTTCACCCATTAACTCCCTTGGAACTGGAGTGGCTCTTGTTGGGGTCTTCTTGTATTCAAGAGCAAAGCGGATGAAGCCAAAGCCGAAGGCTGCATGA 1296 0.4367 MGKMGKWIRASGPIPKYDVFMGVIHIIAQRMHITALALSPSAPFLKPKNLLNRNPNPSPGVVPVQLHLLTSTNGLSCHRSSSLFSSLSSVLFPYPNPRFSGFKFRASSVPENAEETEKSSNLGGILQLGSMFAIWYLLNIYFNIFNKQILKVYPFPATVTAFQFGCGTVLVILMWAFNLYKRPKISKSQFSGILILAVTHTMGNLLTNLSLRKVAVSFTHTIKAMEPFFTVVLATLFLGEKPTLPIVSSLVPIVGGVALASFTESSFNWTGFWSAMASNLTNQSRNVFSKKFMVNKEEALDTINLFSVITVISFLLCTPVAIFIEGIKFTPSYLQFAASQGLNVRELCVRSLLAGICFHSYQQVSYTILQMVSPVTHAVGNCVKRVVVIISSVIFFQTPASPINSLGTGVALVGVFLYSRAKRMKPKPKAA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1614 431 PANTHER SOLUTE CARRIER FAMILY 35 127 423 - -
Vvi14g1614 431 SUPERFAMILY Multidrug resistance efflux transporter EmrE 345 424 - -
Vvi14g1614 431 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 126 429 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vvi14g1614 431 Pfam Triose-phosphate Transporter family 126 419 IPR004853 -
Vvi14g1614 431 SUPERFAMILY Multidrug resistance efflux transporter EmrE 171 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1614 Vvi-Chr14 27436860 27442868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1614 92 429 Antiporters AT3G01550 66.667 4.91e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1614 K15283 - vvi:100266464 734.561