Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1607 ATGGAAACTGGTCTCCTTCTCTCCATCATCTTCCTCGCAACAACATTCTCTTTCATCCATTCCACAAAAGCCAACCCCAGAGCCGACATCATCGCTAGAATATGCAGCAATGACTACGCCCACAACTTCTCCAATTACCTCGACAGCTACTCCAAAATTATAACCCAGTTGCGAGATGAACTGCCTAAGACAAAGTTCGCATTCAAGGAAGCTGGAGAGCCTCCTGACAAAATCTATGTGTTGGCTCAGTGCATGGATGATCTCTCCTTCCAGGATTGTCAAGCCTGCTTCTCTCAGATCAGTTCTCTTTTCCCTGGTTGCTTTCCTGCAACTGGCGGTCGTGTTTATCTTGATGGCTGCTTCCTTAGAGGCGACAATTACAGCTTCTTTCAAGATACTCTCACGCCCATGGATTATTTGGTAACTGCTTTTGTTTTCTTAGTATTTTTTTTTATTTTTTTGGCTGACATCAGCGGTGTCCAGAATTTTGATGATGTAGCCAAGAGTGTGATTGATGAACTGGTCAGGATGACACCAAGTAGGGACGGGTATGCAGCATATGATGAGAGTGCCAATGGTATAACAGTTTACGGTATGGCTAGTTGTTGGAAGACTTTGGACCGTGATCGTTGTGCATCATGCCTTGCTAGTGCAGCCATTTCTGCCTTTGCTTGCTTCCCATCTGCAGAAGGGCGTGTGCTCAATGCTGGCTGTTTTCTACGTTACTCTGATTACAAATTTTATCAGGGCTTTGATTTTTCTTTTTATAGTTTTTCATGGGGATCTCTTGCAGATGCTACATTATCATTCATCTCACACGTCGTTGGCGTGGTCAGTGTCTGCATTTTGGCGATTATTATCGGGTTTTTCATTGGTAAAGCTGCTTACCAAAAACGAAATCAGCAAAATGAAGCAAATGGTAACTCTATTATGAGGAAATTTGTTATGATTGAACACATTCCTCAAATCATCTTCTTGATTAATGAAGAAATTGAAGTGGACAGCTCGGTTGTAAAGAGAAGCTTGCAGTTCAAGTACACGACTCTTGAAAAAGCAACCGACTACTTCAATGAAGCCAACAAACTTGGGCAAGGTGGATTTGGTGAAGTGTTCAAGGGAACCTTAAGAGATGGCAGAGAAATTGCTATAAAGCGTTTATTCATAACGGGACAGAGTGGAGCTCAGGAGGTTTATAACGAAATAGACATTATAGGCAGTGCCTGCCACAAAAACTTGGTTCGTTTCCTTGGTTGCTGCTTCACCAGACATGATAGCTTCCTTGTCTATGAATTCCTGCCCAACAGAAGCCTCGATCGAGTCTTATTTGACACAGAGAAGAAGAAAGAACTACCCTGGAAGATCAGGCTTGGAATAATCATGGGAACAGCAGAAGGCTTAGAGTACCTTCACAAAGACTGTCACGTTCGAATCATTCATAGAGACATCAAGGCCAGCAACGTCTTATTAGACTTCAGATACAGACCAAAGATTGCAGATTTTGGTCTGGCAAGGTTTTATTCCACTGACAGAGCCCTCACCGGCACTGCCATTGCAGGCACACTAGGGTACATGGCCCCTGAATACCTAGCTCAGGGCCGATTAACCGACAAGGTGGATGTTTATAGCTATGGAGTTCTCATACTTGAGATTGTCAGTGGTGTGCAGAATAACAAATTTCAGCTTGATGACTCCCTCAACACTCTAGCCACTGCTACATGGAAGCACTTTCAGTCAAATACAATGACTGAGATTATAGACAAGGGCATGGAGATTGAAGATATGGAAGAAGTCACAAGAGTAATTCAGGTGGGTTTGTTGTGTACTCAAGAATCACCCACTTTACGCCCTGCCATGACTGAAATAATTCAAATGCTTAAACAAAAGGATGTCTCATTGCCTATTCCATCCAAGCCTCCATTCACTGAAGAAAATTTGACAATTTCTCCTGCATTGGGGTGTCCTAGGAGACCAGCTGTGGATGCATATGATCTATGTATATCTTGTGATCATTCTGATACTGAGCTCAGATAA 2031 0.4293 METGLLLSIIFLATTFSFIHSTKANPRADIIARICSNDYAHNFSNYLDSYSKIITQLRDELPKTKFAFKEAGEPPDKIYVLAQCMDDLSFQDCQACFSQISSLFPGCFPATGGRVYLDGCFLRGDNYSFFQDTLTPMDYLVTAFVFLVFFFIFLADISGVQNFDDVAKSVIDELVRMTPSRDGYAAYDESANGITVYGMASCWKTLDRDRCASCLASAAISAFACFPSAEGRVLNAGCFLRYSDYKFYQGFDFSFYSFSWGSLADATLSFISHVVGVVSVCILAIIIGFFIGKAAYQKRNQQNEANGNSIMRKFVMIEHIPQIIFLINEEIEVDSSVVKRSLQFKYTTLEKATDYFNEANKLGQGGFGEVFKGTLRDGREIAIKRLFITGQSGAQEVYNEIDIIGSACHKNLVRFLGCCFTRHDSFLVYEFLPNRSLDRVLFDTEKKKELPWKIRLGIIMGTAEGLEYLHKDCHVRIIHRDIKASNVLLDFRYRPKIADFGLARFYSTDRALTGTAIAGTLGYMAPEYLAQGRLTDKVDVYSYGVLILEIVSGVQNNKFQLDDSLNTLATATWKHFQSNTMTEIIDKGMEIEDMEEVTRVIQVGLLCTQESPTLRPAMTEIIQMLKQKDVSLPIPSKPPFTEENLTISPALGCPRRPAVDAYDLCISCDHSDTELR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1607 676 FunFam Putative DUF26-domain protein kinase 322 431 - -
Vvi14g1607 676 Gene3D Phosphorylase Kinase; domain 1 324 431 - -
Vvi14g1607 676 SUPERFAMILY Protein kinase-like (PK-like) 336 627 IPR011009 -
Vvi14g1607 676 CDD STKc_IRAK 362 627 - -
Vvi14g1607 676 ProSiteProfiles Protein kinase domain profile. 356 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1607 676 FunFam Cysteine-rich receptor-like protein kinase 2 28 129 - -
Vvi14g1607 676 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Vvi14g1607 676 ProSiteProfiles Gnk2-homologous domain profile. 28 129 IPR002902 -
Vvi14g1607 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Vvi14g1607 676 FunFam Cysteine-rich receptor-like protein kinase 3 155 247 - -
Vvi14g1607 676 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 79 643 - -
Vvi14g1607 676 Gene3D Transferase(Phosphotransferase) domain 1 432 632 - -
Vvi14g1607 676 SMART serkin_6 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1607 676 FunFam Cysteine-rich receptor-like protein kinase 2 432 633 - -
Vvi14g1607 676 Pfam Salt stress response/antifungal 35 127 IPR002902 -
Vvi14g1607 676 Pfam Salt stress response/antifungal 161 245 IPR002902 -
Vvi14g1607 676 Pfam Protein tyrosine and serine/threonine kinase 359 625 IPR001245 GO:0004672|GO:0006468
Vvi14g1607 676 Gene3D - 155 247 IPR038408 -
Vvi14g1607 676 Gene3D - 27 129 IPR038408 -
Vvi14g1607 676 ProSiteProfiles Gnk2-homologous domain profile. 145 247 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1607 Vvi-Chr14 27366994 27370901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1607 4 645 Receptor kinase-like Gene Family AT4G28670 47.149 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi14g1607 PK_Tyr_Ser-Thr 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1607 - - vvi:100262995 1196.03