Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1601 ATGGAGTCCAAGGAATCTCAGTTCGCTCTGCCGGTGGATTCCGAACACAAGGCCACCGTGTTCCACCCATTTTCGCTGGCTGCGCCTCACATGCGAGCCTTCCACCTTGCCTGGCTCTCTCTATTCGCCACCTTTTTCTCCACCTTCGCCATTCCTCCTCTTCTCCCGATAATTCGTGAAGATCTTAAGCTCACGGATACTGACATAGGGAATGCTGGAATAGCTTCCTTTATGGGTTCTATCTTTTCTCGTTTAGCGATGGGTACGGCGTGTGATGTTTTCGGTCCGCGAATAGCATGCGCGACGCTGTCTCTTCTCACTGTGCCTATTGTTTTCTCGGCCTGCTTCATTTCCACTCCTCAATCCTTCATCGTTCTCCGCTTCCTCATAGGTTTTTCTCTGGCCAACTTCATCTCCAACCAGTTCTGGATGAGTTCTATGTTTTCAGGCTGCGTGGTGGGGCTCGCCAACGGCGTGGCCGCCGGCTGGGCCAACGTGGGGGCGGGCGCAACCCAGCTCATTATGCCTCTCATCTTCGCTTTCATCACCTCCTTTAACGTTCCTGCTTTCACTGCATGGCGTATCGCGTTCGTCGTCCCTGCTTTGTTCCAAGCGGTGACTGCGCTCATGGTGTTGTTCTACGGCCAGGACCTCCCCGACGGGAACTACAAACGCCGCCAGCGCTCCAGCACCAAGCCCAGAGAGAGCGTATTCAAAGTCCTTCTTCACGGCCTATCGAACTACAGAGGGTGGGTGCTGGGGTTAACATATGGGTACTGTTTTGGAGTGGAACTCACGGTCGATAACATCATAGCACAGTACTTCTACGACAGATTTAATCTGAATATCGAAACAGCCGGAGCCATCGCCGCCAGCTTTGGAGTGGTGAACTTCTTTTCAAGGCCCGCCGGAGGGGTGATTTCAGACGAGATGGGGCGGAGGTTTGGGATAAGGGGGAGGCTGTGGAGCTTGTGGATAGTGCAGACGGTGGCTGGGTTGCTGTGTATTCTACTCGGACGAGTCAACACGCTGGGGGCCTCGATATTGGTGATATGTGCCTTCTCAGTGTTCGTCCAAGCGGCTTCTGGGCTCACCTTTGGTGTGGTTCCCTTCGTTTCCAAAAGGTCATTGGGAGTGATATCAGGGATGACAGGGAGTGGTGGGACGGTGGGCGCAGTGGTGACCCAGCTGCTGTTGTTTTCAGGCTCAAAGTACTCCAAGGAAACAAGCATTTCTCTAATGGGCGTTATGATGATTGTCTGTAGCATTCCCGTTACTTTCATCTACTTCCCTCAATGGGGTGGCATGTTCTGTGGACCTTCTTATGATTCAGACTGGGTTGATGAAGAGTATCGCCTAATTGAATAA 1368 0.527 MESKESQFALPVDSEHKATVFHPFSLAAPHMRAFHLAWLSLFATFFSTFAIPPLLPIIREDLKLTDTDIGNAGIASFMGSIFSRLAMGTACDVFGPRIACATLSLLTVPIVFSACFISTPQSFIVLRFLIGFSLANFISNQFWMSSMFSGCVVGLANGVAAGWANVGAGATQLIMPLIFAFITSFNVPAFTAWRIAFVVPALFQAVTALMVLFYGQDLPDGNYKRRQRSSTKPRESVFKVLLHGLSNYRGWVLGLTYGYCFGVELTVDNIIAQYFYDRFNLNIETAGAIAASFGVVNFFSRPAGGVISDEMGRRFGIRGRLWSLWIVQTVAGLLCILLGRVNTLGASILVICAFSVFVQAASGLTFGVVPFVSKRSLGVISGMTGSGGTVGAVVTQLLLFSGSKYSKETSISLMGVMMIVCSIPVTFIYFPQWGGMFCGPSYDSDWVDEEYRLIE* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1601 455 FunFam Nitrate transporter 2.1 234 435 - -
Vvi14g1601 455 FunFam High affinity nitrate transporter 2.5 26 222 - -
Vvi14g1601 455 SUPERFAMILY MFS general substrate transporter 26 429 IPR036259 -
Vvi14g1601 455 ProSiteProfiles Major facilitator superfamily (MFS) profile. 33 433 IPR020846 GO:0022857
Vvi14g1601 455 ProSitePatterns Sugar transport proteins signature 1. 304 319 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vvi14g1601 455 Gene3D MFS general substrate transporter like domains 235 434 IPR036259 -
Vvi14g1601 455 Pfam Major Facilitator Superfamily 38 394 IPR011701 GO:0022857|GO:0055085
Vvi14g1601 455 Gene3D MFS general substrate transporter like domains 28 222 IPR036259 -
Vvi14g1601 455 CDD MFS_NRT2_like 34 427 IPR044772 GO:0015112
Vvi14g1601 455 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 3 450 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1601 Vvi-Chr14 27319685 27322069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1601 7 450 Inorganic Solute Cotransporters AT1G12940 62.693 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1601 K02575 - vvi:100261203 867.84