Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1596 ATGAATACGTCGCAGTTCATGGACAAGCAGATCATGGATCTCTCTGCCGGATCGCAGAGCAACGATTTTATCAATCTCATGAGCCCTGAAGATGACCACTTGACTGGCGTCGGTGGCGGTGGCGGTGTGGGTTCTAAGAAGGAAGAGATCGTGCCCAGCTACGATTTTCTGCCAATTCGTCCCAAGGGTTCTTCGCAGTTTTCGAATCTTGATGCTGTCGGTGGTGCAGGAGGACCTAGGGCTTGGAGCTCGACTGACTCCAAGACCAACACTCCTGGCATTAGAAATTATGGTTCTCTCGACTCTAATGAACTTTCAAAAATCAGCCTTGAGAAAGATCGAAATATTGATGCAGCAATTGTATCTGAGATTGATCGAACAATGAAAAAACATGCTGATAATTTGCTACATGTGTTGGAAGGTCTTAGTGCACGACTTACACAGCTGGAGAGCAGAACTCGGAACCTTGAGAATTCTGTGGATGATTTGAAGGTATCTGTTGGAAATAATCATGGCAGTGCTGATGGAAAAATGAGGCAGCTGGAAAATATTCTTAGAGAGGTGCAAACTGGTGTACAGGTTTTAAGGGACAAACAAGAAATAGTGGAGGCTCACCTACAGCTTGCAAAGCTTCAAGTGTCCAAAGCAGACCAGCAATCAGAAACCCAGAACACTGTGACCTTAGATTCTGCAAAGCAAGCAGCATCTCCTCCTCAGCAATCTCACCAACCACTTCCTCCACCTGTTACTCCTCAAACACTTCCTGCACTCCCTCCCCCTAATGCTCCGCCACCTCCTCCCCAACTCAATATGCAGTCTCCTCCAGCTCAGCTACCTAGTCAATTCCCTCCGAACCAGATTCCTTCCATCCCACAGCGAGAGCCCTACTTTCAACCACCTGGTCAGGCACAAGAAGCTCCCAACCAGCAATACCAACTACCACCGACCCAGCAACCACAGCCGCCTCCTGCAGCTCCATCACATCAACAATATCAACCAGCCTCTCTTCCACAATATTCTCAGCCACCCCAGCTGCCGCAACAGCACCATTCTATTGCACCCATTAATCCTCCTCCTCAACACCAACCTCCATTAGGTCATCATCCTGAAGAAACGTCTTATGTTCCACCTCAGACCTACCCTCCAAGCCTTCGCCAGCCACCCTCTCAGCCACCCTCTCAGCCACTTTCTGGGGCACCTCCCTCTCAACAGTTCTATGGGCCACCCTCGCACATGTATGAGGTCCCATCTGGCAGATCCAGTTCTGGCTTTTCTACTGGATTTGTTCCTCCACCATCTGGGCCTACTGAACCATATTCTTACAGTGGATCACCCTCTCAATATGGTAGTAACATGCCAATGAAACCACAACAGTTCTCATCTGGTGTCCAAGGTGGTGGAAGTGGTTACCCACAACTCCCAACTGCTCGGGTATTACCACATGCACTGCCTACGGCCTCTGGGCCTGTTGGTGGTTCTGGTCCTGGTTCTGGTTCATCCGGAAGTGGAAATAGGGTTCCTATAGATGATGTGGTCGACAAAGTGACAAATATGGGGTTCCCAAGAGACGTTGTGAGAGCAACTGTTCGGAAGCTGACAGAAAATGGCCAGTCAGTTGACCTGAATGTGGTGCTGGATAAACTGATGAATGATGGGGAAGTCCAGCCCCCAAGAGGTTGGTTTGGTCGGTAA 1692 0.4941 MNTSQFMDKQIMDLSAGSQSNDFINLMSPEDDHLTGVGGGGGVGSKKEEIVPSYDFLPIRPKGSSQFSNLDAVGGAGGPRAWSSTDSKTNTPGIRNYGSLDSNELSKISLEKDRNIDAAIVSEIDRTMKKHADNLLHVLEGLSARLTQLESRTRNLENSVDDLKVSVGNNHGSADGKMRQLENILREVQTGVQVLRDKQEIVEAHLQLAKLQVSKADQQSETQNTVTLDSAKQAASPPQQSHQPLPPPVTPQTLPALPPPNAPPPPPQLNMQSPPAQLPSQFPPNQIPSIPQREPYFQPPGQAQEAPNQQYQLPPTQQPQPPPAAPSHQQYQPASLPQYSQPPQLPQQHHSIAPINPPPQHQPPLGHHPEETSYVPPQTYPPSLRQPPSQPPSQPLSGAPPSQQFYGPPSHMYEVPSGRSSSGFSTGFVPPPSGPTEPYSYSGSPSQYGSNMPMKPQQFSSGVQGGGSGYPQLPTARVLPHALPTASGPVGGSGPGSGSSGSGNRVPIDDVVDKVTNMGFPRDVVRATVRKLTENGQSVDLNVVLDKLMNDGEVQPPRGWFGR* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1596 563 Coils Coil 132 166 - -
Vvi14g1596 563 MobiDBLite consensus disorder prediction 213 508 - -
Vvi14g1596 563 Coils Coil 178 198 - -
Vvi14g1596 563 MobiDBLite consensus disorder prediction 415 429 - -
Vvi14g1596 563 MobiDBLite consensus disorder prediction 380 398 - -
Vvi14g1596 563 Pfam UBA-like domain (DUF1421) 508 552 IPR010820 -
Vvi14g1596 563 MobiDBLite consensus disorder prediction 329 351 - -
Vvi14g1596 563 MobiDBLite consensus disorder prediction 439 468 - -
Vvi14g1596 563 MobiDBLite consensus disorder prediction 314 328 - -
Vvi14g1596 563 MobiDBLite consensus disorder prediction 240 295 - -
Vvi14g1596 563 MobiDBLite consensus disorder prediction 213 239 - -
Vvi14g1596 563 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1596 Vvi-Chr14 27277498 27282284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1596 1 297 Trihelix Transcription Factor Family AT5G14540 51.140 4.31e-77 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1596 - - vvi:100264681 872.848